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Recombinant Human Ubiquitin AMC Protein, CF

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Product Details

Summary
Reactivity HuSpecies Glossary
Applications Enzyme Activity
Format
Carrier-Free

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Recombinant Human Ubiquitin AMC Protein, CF Summary

Details of Functionality
Recombinant Human Ubiquitin-AMC is a fluorogenic substrate for some Ubiquitin-specific isopeptidases. Release of AMC fluorescence can be monitored with an excitation wavelength of 345 nm and an emission wavelength of 445 nm. Reaction conditions will need to be optimized for each specific application. We recommend an initial Recombinant Human Ubiquitin-AMC concentration of 0.1-1 μM.
Source
E. coli-derived human Ubiquitin protein
Accession #
Protein/Peptide Type
Recombinant Proteins
Gene
UBB

Applications/Dilutions

Dilutions
  • Enzyme Activity
Theoretical MW
8.7 kDa.
Disclaimer note: The observed molecular weight of the protein may vary from the listed predicted molecular weight due to post translational modifications, post translation cleavages, relative charges, and other experimental factors.
Publications
Read Publications using
U-550 in the following applications:

Packaging, Storage & Formulations

Storage
Protect from light. Use a manual defrost freezer and avoid repeated freeze-thaw cycles.
  • 6 months from date of receipt, -70 °C as supplied.
  • 3 months, -70 °C under sterile conditions after opening.
Buffer
Supplied as a solution in DMSO.

Notes

This product is produced by and ships from R&D Systems, Inc., a Bio-Techne brand.

Alternate Names for Recombinant Human Ubiquitin AMC Protein, CF

  • RPS27A
  • UBA52
  • UBB ubiquitin B
  • UBB
  • UBC
  • Ubiquitin

Background

Ubiquitin is a 76 amino acid (aa) protein that is ubiquitously expressed in all eukaryotic organisms. Ubiquitin is highly conserved with 96% aa sequence identity shared between human and yeast Ubiquitin, and 100% aa sequence identity shared between human and mouse Ubiquitin (1). In mammals, four Ubiquitin genes encode for two Ubiquitin-ribosomal fusion proteins and two poly-Ubiquitin proteins. Cleavage of the Ubiquitin precursors by deubiquitinating enzymes gives rise to identical Ubiquitin monomers each with a predicted molecular weight of 8.6 kDa. Conjugation of Ubiquitin to target proteins involves the formation of an isopeptide bond between the C-terminal glycine residue of Ubiquitin and a lysine residue in the target protein. This process of conjugation, referred to as ubiquitination or ubiquitylation, is a multi-step process that requires three enzymes: a Ubiquitin-activating (E1) enzyme, a Ubiquitin-conjugating (E2) enzyme, and a Ubiquitin ligase (E3). Ubiquitination is classically recognized as a mechanism to target proteins for degradation and as a result, Ubiquitin was originally named ATP-dependent Proteolysis Factor 1 (APF-1) (2,3). In addition to protein degradation, ubiquitination has been shown to mediate a variety of biological processes such as signal transduction, endocytosis, and post-endocytic sorting (4-7).

This fluorogenic substrate for Ubiquitin hydrolases is based on the C-terminus derivatization of Ubiquitin with 7-amino-4-methylcoumarin (AMC). Ubiquitin-AMC is an exquisitely sensitive substrate for UCHL3 (Km = 0.039 μM) and for Isopeptidase-T (Km = 0.17 - 1.4 μM). Ubiquitin-AMC is useful for studying Ubiquitin hydrolases when detection sensitivity or continuous monitoring of activity is essential.

  1. Sharp, P.M. & W.-H. Li. (1987) Trends Ecol. Evol. 2:328.
  2. Ciechanover, A. et al. (1980 ) Proc. Natl. Acad. Sci. USA 77:1365.
  3. Hershko, A. et al. (1980) Proc. Natl. Acad. Sci. USA 77:1783.
  4. Greene, W. et al. (2012) PLoS Pathog. 8:e1002703.
  5. Tong, X. et al. (2012) J. Biol. Chem. 287:25280.
  6. Wei, W. et al. (2004) Nature 428:194.
  7. Wertz, I.E. et al. (2004) Nature 430:694.
  8. Dang L.C., et al. (1998) Biochem. 37:1868-1879.
  9. Mason D.E., et al. (2004) Biochem 43:6535-6544.
  10. Stein R.L., et al. (1998) Biochem. 34:12616-12623.  

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Publications for Ubiquitin (U-550)(51)

We have publications tested in 4 confirmed species: Human, N/A, Virus, Virus - PRRSV.

We have publications tested in 2 applications: Bioassay, Enzyme Assay.


Filter By Application
Bioassay
(42)
Enzyme Assay
(8)
All Applications
Filter By Species
Human
(29)
N/A
(6)
Virus
(2)
Virus - PRRSV
(1)
All Species
Showing Publications 1 - 10 of 51. Show All 51 Publications.
Publications using U-550 Applications Species
Caba, C;Black, M;Liu, Y;DaDalt, AA;Mallare, J;Fan, L;Harding, RJ;Wang, Y;Vacratsis, PO;Huang, R;Zhuang, Z;Tong, Y; Autoinhibition of ubiquitin-specific protease 8: insights into domain interactions and mechanisms of regulation The Journal of biological chemistry 2024-08-28 [PMID: 39214302] (N/A, Bioassay) Bioassay N/A
King, HR;Bycroft, M;Nguyen, TB;Kelly, G;Vinogradov, AA;Rowling, PJE;Stott, K;Ascher, DB;Suga, H;Itzhaki, LS;Artavanis-Tsakonas, K; Targeting the Plasmodium falciparum UCHL3 ubiquitin hydrolase using chemically constrained peptides Proceedings of the National Academy of Sciences of the United States of America 2024-05-21 [PMID: 38739798] (Bioassay, N/A) Bioassay N/A
Sato, H;Ito, T;Hayashi, T;Kitano, S;Erdjument-Bromage, H;Bott, MJ;Toyooka, S;Zauderer, M;Ladanyi, M; The BAP1 nuclear deubiquitinase is involved in the nonhomologous end-joining pathway of double-strand DNA repair through interaction with DNA-PK Oncogene 2024-02-21 [PMID: 38383726] (Bioassay, N/A) Bioassay N/A
Ren, W;Xu, Z;Chang, Y;Ju, F;Wu, H;Liang, Z;Zhao, M;Wang, N;Lin, Y;Xu, C;Chen, S;Rao, Y;Lin, C;Yang, J;Liu, P;Zhang, J;Huang, C;Xia, N; Pharmaceutical targeting of OTUB2 sensitizes tumors to cytotoxic T cells via degradation of PD-L1 Nature communications 2024-01-02 [PMID: 38167274] (Bioassay, Human) Bioassay Human
Bailey-Elkin, BA;Knaap, RCM;De Silva, A;Boekhoud, IM;Mous, S;van Vught, N;Khajehpour, M;van den Born, E;Kikkert, M;Mark, BL; Demonstrating the importance of porcine reproductive and respiratory syndrome virus papain-like protease 2 deubiquitinating activity in viral replication by structure-guided mutagenesis PLoS pathogens 2023-12-14 [PMID: 38096325] (Bioassay, N/A) Bioassay N/A
Maniv, I;Sarji, M;Bdarneh, A;Feldman, A;Ankawa, R;Koren, E;Magid-Gold, I;Reis, N;Soteriou, D;Salomon-Zimri, S;Lavy, T;Kesselman, E;Koifman, N;Kurz, T;Kleifeld, O;Michaelson, D;van Leeuwen, FW;Verheijen, BM;Fuchs, Y;Glickman, MH; Altered ubiquitin signaling induces Alzheimer's disease-like hallmarks in a three-dimensional human neural cell culture model Nature communications 2023-09-22 [PMID: 37739965] (Bioassay, N/A) Bioassay N/A
M Kang, SG Park, SA Lee, S Kim, D Lee, ME Shirbhate, SY Youn, KM Kim, SS Cha, J Kwon Targeting BAP1 with small compound inhibitor for colon cancer treatment Scientific Reports, 2023-02-08;13(1):2264. 2023-02-08 [PMID: 36754982] (Bioassay, Human) Bioassay Human
WC Chan, X Liu, RS Magin, NM Girardi, SB Ficarro, W Hu, MI Tarazona G, CA Starnbach, A Felix, G Adelmant, AC Varca, B Hu, AS Bratt, E DaSilva, NJ Schauer, I Jaen Maiso, EK Dolen, AX Ayala, JA Marto, SJ Buhrlage Accelerating inhibitor discovery for deubiquitinating enzymes Nature Communications, 2023-02-08;14(1):686. 2023-02-08 [PMID: 36754960] (Bioassay, Human) Bioassay Human
YF Cao, L Xie, BB Tong, MY Chu, WQ Shi, X Li, JZ He, SH Wang, ZY Wu, DX Deng, YQ Zheng, ZM Li, XE Xu, LD Liao, YW Cheng, LY Li, LY Xu, EM Li Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma Cell Death and Differentiation, 2022-12-16;0(0):. 2022-12-16 [PMID: 36526897] (Bioassay, Human) Bioassay Human
S Zhang, S Zou, D Yin, L Zhao, D Finley, Z Wu, Y Mao USP14-regulated allostery of the human proteasome by time-resolved cryo-EM Nature, 2022-04-27;605(7910):567-574. 2022-04-27 [PMID: 35477760] (Bioassay, Human) Bioassay Human
Show All 51 Publications.

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Using Ubiquitin Antibodies in Various Disease Research
Ubiquitin is a small, highly conserved protein which plays an important role in protein breakdown, covalently bonding to proteins to mark them for proteolytic degradation in a process called ubiquitination. Ubiquitin also binds to inclusion bodies (ac...  Read full blog post.

The Heat is On: Heat Shock Proteins and the Link to Cancer
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Bioinformatics

Gene Symbol UBB
Uniprot