Balogh, A;Bódi-Jakus, M;Karl, VR;Bellák, T;Széky, B;Farkas, J;Lamberto, F;Novak, D;Fehér, A;Zana, M;Dinnyés, A; Establishment of human pluripotent stem cell-derived cortical neurosphere model to study pathomechanisms and chemical toxicity in Kleefstra syndrome Scientific reports 2024-09-29 [PMID: 39343771] (Bioassay, Human) |
Bioassay |
Human |
Wang, X;Yang, S;Zheng, C;Huang, C;Yao, H;Guo, Z;Wu, Y;Wang, Z;Wu, Z;Ge, R;Cheng, W;Yan, Y;Jiang, S;Sun, J;Li, X;Xie, Q;Wang, H; Multi-Omics Profiles of Small Intestine Organoids in Reaction to Breast Milk and Different Infant Formula Preparations Nutrients 2024-09-02 [PMID: 39275267] (Bioassay, Human) |
Bioassay |
Human |
Lekkala, VKR;Shrestha, S;Al Qaryoute, A;Dhinoja, S;Acharya, P;Raheem, A;Jagadeeswaran, P;Lee, MY; Enhanced Maturity and Functionality of Vascularized Human Liver Organoids through 3D Bioprinting and Pillar Plate Culture bioRxiv : the preprint server for biology 2024-08-22 [PMID: 39229042] (Bioassay, Human) |
Bioassay |
Human |
Basu, B;Karwatka, M;China, B;McKibbin, M;Khan, K;Inglehearn, CF;Ladbury, JE;Johnson, CA; Glycogen myophosphorylase loss causes increased dependence on glucose in iPSC-derived retinal pigment epithelium The Journal of biological chemistry 2024-07-13 [PMID: 39009342] (Bioassay, Human) |
Bioassay |
Human |
Cao, L;Lin, G;Fan, D;Weng, K;Chen, Y;Wang, J;Li, P;Zheng, C;Huang, C;Xie, J; NUAK1 activates STAT5/GLI1/SOX2 signaling to enhance cancer cell expansion and drives chemoresistance in gastric cancer Cell reports 2024-07-23 [PMID: 38996065] (Bioassay, Human) |
Bioassay |
Human |
Vihma, H;Li, K;Welton-Arndt, A;Smith, AL;Bettadapur, KR;Gilmore, RB;Gao, E;Cotney, JL;Huang, HC;Collins, JL;Chamberlain, SJ;Lee, HM;Aubé, J;Philpot, BD; Ube3a unsilencer for the potential treatment of Angelman syndrome Nature communications 2024-07-08 [PMID: 38977672] (Bioassay, Human) |
Bioassay |
Human |
Chien, Y;Huang, XY;Yarmishyn, AA;Chien, CS;Liu, YH;Hsiao, YJ;Lin, YY;Lai, WY;Huang, SC;Lee, MS;Chiou, SH;Yang, YP;Chiou, GY; Paracrinal regulation of neutrophil functions by coronaviral infection in iPSC-derived alveolar type II epithelial cells Virus research 2024-07-01 [PMID: 38754785] (Bioassay, Human) |
Bioassay |
Human |
Jang, KK;Ercelen, D;Cen Feng, JYC;Gurunathan, S;Zhou, C;Korman, A;Newell, L;Hudesman, D;Jones, DR;Loke, P;Axelrad, JE;Cadwell, K; Tofacitinib uptake by patient-derived intestinal organoids predicts individual clinical responsiveness bioRxiv : the preprint server for biology 2024-03-06 [PMID: 38712048] (Bioassay, Human) |
Bioassay |
Human |
Kang, EJ;Kim, JH;Kim, YE;Lee, H;Jung, KB;Chang, DH;Lee, Y;Park, S;Lee, EY;Lee, EJ;Kang, HB;Rhyoo, MY;Seo, S;Park, S;Huh, Y;Go, J;Choi, JH;Choi, YK;Lee, IB;Choi, DH;Seo, YJ;Noh, JR;Kim, KS;Hwang, JH;Jeong, JS;Kwon, HJ;Yoo, HM;Son, MY;Kim, YG;Lee, DH;Kim, TY;Kwon, HJ;Kim, MH;Kim, BC;Kim, YH;Kang, D;Lee, CH; The secreted protein Amuc_1409 from Akkermansia muciniphila improves gut health through intestinal stem cell regulation Nature communications 2024-04-06 [PMID: 38582860] (Bioassay, Human) |
Bioassay |
Human |
Wang, M;Zhang, L;Novak, SW;Yu, J;Gallina, IS;Xu, LL;Lim, CK;Fernandes, S;Shokhirev, MN;Williams, AE;Saxena, MD;Coorapati, S;Parylak, SL;Quintero, C;Molina, E;Andrade, LR;Manor, U;Gage, FH; Morphological diversification and functional maturation of human astrocytes in glia-enriched cortical organoid transplanted in mouse brain Nature biotechnology 2024-02-28 [PMID: 38418648] (Bioassay, Human) |
Bioassay |
Human |
Kwon, O;Lee, H;Jung, J;Son, YS;Jeon, S;Yoo, WD;Son, N;Jung, KB;Choi, E;Lee, IC;Kwon, HJ;Kim, C;Lee, MO;Cho, HS;Kim, DS;Son, MY; Chemically-defined and scalable culture system for intestinal stem cells derived from human intestinal organoids Nature communications 2024-01-27 [PMID: 38280855] (Differentiation, Human) |
Differentiation |
Human |
Kuroda, T;Yasuda, S;Matsuyama, S;Miura, T;Sawada, R;Matsuyama, A;Yamamoto, Y;Morioka, MS;Kawaji, H;Kasukawa, T;Itoh, M;Akutsu, H;Kawai, J;Sato, Y; ROR2 expression predicts human induced pluripotent stem cell differentiation into neural stem/progenitor cells and GABAergic neurons Scientific reports 2024-01-06 [PMID: 38184695] (Bioassay, Human) |
Bioassay |
Human |
Reumann, D;Krauditsch, C;Novatchkova, M;Sozzi, E;Wong, SN;Zabolocki, M;Priouret, M;Doleschall, B;Ritzau-Reid, KI;Piber, M;Morassut, I;Fieseler, C;Fiorenzano, A;Stevens, MM;Zimmer, M;Bardy, C;Parmar, M;Knoblich, JA; In vitro modeling of the human dopaminergic system using spatially arranged ventral midbrain-striatum-cortex assembloids Nature methods 2023-12-01 [PMID: 38052989] (Bioassay, Human) |
Bioassay |
Human |
Múnera, JO;Kechele, DO;Bouffi, C;Qu, N;Jing, R;Maity, P;Enriquez, JR;Han, L;Campbell, I;Mahe, MM;McCauley, HA;Zhang, X;Sundaram, N;Hudson, JR;Zarsozo-Lacoste, A;Pradhan, S;Tominaga, K;Sanchez, JG;Weiss, AA;Chatuvedi, P;Spence, JR;Hachimi, M;North, T;Daley, GQ;Mayhew, CN;Hu, YC;Takebe, T;Helmrath, MA;Wells, JM; Development of functional resident macrophages in human pluripotent stem cell-derived colonic organoids and human fetal colon Cell stem cell 2023-11-02 [PMID: 37922878] (Cell Culture) |
Cell Culture |
|
Menjivar, NG;Gad, A;Thompson, RE;Meyers, MA;Hollinshead, FK;Tesfaye, D; Bovine oviductal organoids: a multi-omics approach to capture the cellular and extracellular molecular response of the oviduct to heat stress BMC genomics 2023-10-27 [PMID: 37891479] (Bioassay, Bovine) |
Bioassay |
Bovine |
Sutton, K;Nash, T;Sives, S;Borowska, D;Mitchell, J;Vohra, P;Stevens, MP;Vervelde, L; Disentangling the innate immune responses of intestinal epithelial cells and lamina propria cells to Salmonella Typhimurium infection in chickens Frontiers in microbiology 2023-10-03 [PMID: 37854334] (Bioassay, Chicken) |
Bioassay |
Chicken |
Hsu, WH;LaBella, KA;Lin, Y;Xu, P;Lee, R;Hsieh, CE;Yang, L;Zhou, A;Blecher, JM;Wu, CJ;Lin, K;Shang, X;Jiang, S;Spring, DJ;Xia, Y;Chen, P;Shen, JP;Kopetz, S;DePinho, RA; Oncogenic KRAS drives lipo-fibrogenesis to promote angiogenesis and colon cancer progression Cancer discovery 2023-09-28 [PMID: 37768068] (Bioassay, Xenograft) |
Bioassay |
Xenograft |
Lassé, M;El Saghir, J;Berthier, CC;Eddy, S;Fischer, M;Laufer, SD;Kylies, D;Hutzfeldt, A;Bonin, LL;Dumoulin, B;Menon, R;Vega-Warner, V;Eichinger, F;Alakwaa, F;Fermin, D;Billing, AM;Minakawa, A;McCown, PJ;Rose, MP;Godfrey, B;Meister, E;Wiech, T;Noriega, M;Chrysopoulou, M;Brandts, P;Ju, W;Reinhard, L;Hoxha, E;Grahammer, F;Lindenmeyer, MT;Huber, TB;Schlüter, H;Thiel, S;Mariani, LH;Puelles, VG;Braun, F;Kretzler, M;Demir, F;Harder, JL;Rinschen, MM; An integrated organoid omics map extends modeling potential of kidney disease Nature communications 2023-08-14 [PMID: 37580326] (Bioassay, Human) |
Bioassay |
Human |
Mubariz, F;Saadin, A;Lingenfelter, N;Sarkar, C;Banerjee, A;Lipinski, MM;Awad, O; Deregulation of mTORC1-TFEB axis in human iPSC model of GBA1-associated Parkinson's disease Frontiers in neuroscience 2023-06-02 [PMID: 37332877] (Bioassay, Human) |
Bioassay |
Human |
Kuo, C;Choi, S;van Unen, V;Zhang, H;Rustagi, A;Alwahabi, S;Santos, A;Chan, J;Lam, B;Solis, D;Mah, J;R�ltgen, K;Trope, W;Guh-Siesel, A;Lin, Z;Beck, A;Edwards, C;Mallajosyula, V;Martin, B;Dunn, J;Shrager, J;Baric, R;Pinsky, B;Boyd, S;Blish, C;Davis, M; Organoid modeling of lung-resident immune responses to SARS-CoV-2 infection Research square 2023-05-05 [PMID: 37205380] (Bioassay, Human) |
Bioassay |
Human |
Yamakawa, K;Koyanagi-Aoi, M;Machinaga, A;Kakiuchi, N;Hirano, T;Kodama, Y;Aoi, T; Blockage of retinoic acid signaling via RAR? suppressed the proliferation of pancreatic cancer cells by arresting the cell cycle progression of the G1-S phase Cancer cell international 2023-05-17 [PMID: 37198667] (Cell Culture, Human) |
Cell Culture |
Human |
Darwish, NHE;Hussein, KA;Elmasry, K;Ibrahim, AS;Humble, J;Moustafa, M;Awadalla, F;Al-Shabrawey, M; Bone Morphogenetic Protein-4 Impairs Retinal Endothelial Cell Barrier, a Potential Role in Diabetic Retinopathy Cells 2023-04-28 [PMID: 37174679] (Bioassay, Human) |
Bioassay |
Human |
Matkovic Leko, I;Schneider, RT;Thimraj, TA;Schrode, N;Beitler, D;Liu, HY;Beaumont, K;Chen, YW;Snoeck, HW; A distal lung organoid model to study interstitial lung disease, viral infection and human lung development Nature protocols 2023-05-10 [PMID: 37165073] (Bioassay, Human) |
Bioassay |
Human |
X Huang, T Nero, R Weeraseker, KH Matej, A Hinbest, Z Jiang, RF Lee, L Wu, C Chak, J Nijjer, I Gibaldi, H Yang, N Gamble, WL Ng, SA Malaker, K Sumigray, R Olson, J Yan Vibrio cholerae biofilms use modular adhesins with glycan-targeting and nonspecific surface binding domains for colonization Nature Communications, 2023-04-13;14(1):2104. 2023-04-13 [PMID: 37055389] (Bioassay, Mouse) |
Bioassay |
Mouse |
AH Ghobashi, TT Vuong, JW Kimani, HM O'Hagan Activation of AKT induces EZH2-mediated beta-catenin trimethylation in colorectal cancer bioRxiv : the preprint server for biology, 2023-02-04;0(0):. 2023-02-04 [PMID: 36778289] (Bioassay, Human) |
Bioassay |
Human |
J Tian, JH Chen, SX Chao, K Pelka, M Giannakis, J Hess, K Burke, V Jorgji, P Sindurakar, J Braverman, A Mehta, T Oka, M Huang, D Lieb, M Spurrell, JN Allen, TA Abrams, JW Clark, AC Enzinger, PC Enzinger, SJ Klempner, NJ McCleary, JA Meyerhardt, DP Ryan, MB Yurgelun, K Kanter, EE Van Sevent, I Baiev, G Chi, J Jarnagin, WB Bradford, E Wong, AG Michel, IJ Fetter, G Siravegna, AJ Gemma, A Sharpe, S Demehri, R Leary, CD Campbell, O Yilmaz, GA Getz, AR Parikh, N Hacohen, RB Corcoran Combined PD-1, BRAF and MEK inhibition in BRAFV600E colorectal cancer: a phase 2 trial Nature Medicine, 2023-01-26;0(0):. 2023-01-26 [PMID: 36702949] (Bioassay, Human) |
Bioassay |
Human |
P Kakni, B Jutten, D Teixeira O, J Penders, R Truckenmül, P Habibovic, S Giselbrech Hypoxia-tolerant apical-out intestinal organoids to model host-microbiome interactions Journal of tissue engineering, 2023-01-18;14(0):2041731422114. 2023-01-18 [PMID: 36699634] (Bioassay, Human) |
Bioassay |
Human |
P Madrigal, S Deng, Y Feng, S Militi, KJ Goh, R Nibhani, R Grandy, A Osnato, D Ortmann, S Brown, S Pauklin Epigenetic and transcriptional regulations prime cell fate before division during human pluripotent stem cell differentiation Nature Communications, 2023-01-25;14(1):405. 2023-01-25 [PMID: 36697417] (Bioassay, Human) |
Bioassay |
Human |
YF Wong, Y Kumar, M Proks, JAR Herrera, MM Rothová, RS Monteiro, S Pozzi, RE Jennings, NA Hanley, WA Bickmore, JM Brickman Expansion of ventral foregut is linked to changes in the enhancer landscape for organ-specific differentiation Nature Cell Biology, 2023-01-23;0(0):. 2023-01-23 [PMID: 36690849] (Bioassay, Human) |
Bioassay |
Human |
Y Sun, OY Revach, S Anderson, EA Kessler, CH Wolfe, A Jenney, CE Mills, EJ Robitschek, TGR Davis, S Kim, A Fu, X Ma, J Gwee, P Tiwari, PP Du, P Sindurakar, J Tian, A Mehta, AM Schneider, K Yizhak, M Sade-Feldm, T LaSalle, T Sharova, H Xie, S Liu, WA Michaud, R Saad-Beret, KB Yates, A Iracheta-V, JKE Spetz, X Qin, KA Sarosiek, G Zhang, JW Kim, MY Su, AM Cicerchia, MQ Rasmussen, SJ Klempner, D Juric, SI Pai, DM Miller, A Giobbie-Hu, JH Chen, K Pelka, DT Frederick, S Stinson, E Ivanova, AR Aref, CP Paweletz, DA Barbie, DR Sen, DE Fisher, RB Corcoran, N Hacohen, PK Sorger, KT Flaherty, GM Boland, RT Manguso, RW Jenkins Targeting TBK1 to overcome resistance to cancer immunotherapy Nature, 2023-01-12;0(0):. 2023-01-12 [PMID: 36634707] (Bioassay, Human) |
Bioassay |
Human |
AJ Stevens, AR Harris, J Gerdts, KH Kim, C Trentesaux, JT Ramirez, WL McKeithan, F Fattahi, OD Klein, DA Fletcher, WA Lim Programming Multicellular Assembly with Synthetic Cell Adhesion Molecules Nature, 2022-12-12;0(0):. 2022-12-12 [PMID: 36509107] (Bioassay, Mouse) |
Bioassay |
Mouse |
AJ Stevens, AR Harris, J Gerdts, KH Kim, C Trentesaux, JT Ramirez, WL McKeithan, F Fattahi, OD Klein, DA Fletcher, WA Lim Programming Multicellular Assembly with Synthetic Cell Adhesion Molecules Nature, 2022;0(0):. 2022 [PMID: 36509107] (Bioassay, Mouse) |
Bioassay |
Mouse |
RE Thompson, MA Meyers, C Premananda, FK Hollinshea Generation and cryopreservation of feline oviductal organoids Theriogenology, 2022-11-17;196(0):167-173. 2022-11-17 [PMID: 36423511] (Bioassay, Feline) |
Bioassay |
Feline |
ESY Ng, N Kady, J Hu, A Dave, Z Jiang, J Pei, MB Gorin, A Matynia, RA Radu Membrane Attack Complex Mediates Retinal Pigment Epithelium Cell Death in Stargardt Macular Degeneration Cells, 2022-11-02;11(21):. 2022-11-02 [PMID: 36359858] (Bioassay, Human) |
Bioassay |
Human |
K Johnson, S Freedman, R Braun, C LaBonne Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions BMC Genomics, 2022-10-23;23(1):723. 2022-10-23 [PMID: 36273135] (Bioassay, Frog) |
Bioassay |
Frog |
A Iannielli, M Luoni, SG Giannelli, R Ferese, G Ordazzo, M Fossati, A Raimondi, F Opazo, O Corti, JHM Prehn, S Gambardell, R Melki, V Broccoli Modeling native and seeded Synuclein aggregation and related cellular dysfunctions in dopaminergic neurons derived by a new set of isogenic iPSC lines with SNCA multiplications Cell Death & Disease, 2022-10-19;13(10):881. 2022-10-19 [PMID: 36261424] (Bioassay, Human) |
Bioassay |
Human |
H Marei, WK Tsai, YS Kee, K Ruiz, J He, C Cox, T Sun, S Penikalapa, P Dwivedi, M Choi, D Kan, P Saenz-Lope, K Dorighi, P Zhang, YT Kschonsak, N Kljavin, D Amin, I Kim, AG Mancini, T Nguyen, C Wang, E Janezic, A Doan, E Mai, H Xi, C Gu, M Heinlein, B Biehs, J Wu, I Lehoux, S Harris, L Comps-Agra, D Seshasayee, FJ de Sauvage, M Grimmer, J Li, NJ Agard, F de Sousa E Antibody targeting of E3 ubiquitin ligases for receptor degradation Nature, 2022-09-21;610(7930):182-189. 2022-09-21 [PMID: 36131013] (Bioassay, Human) |
Bioassay |
Human |
K Kishimoto, K Iwasawa, A Sorel, C Ferran-Her, L Han, M Morimoto, JM Wells, T Takebe, AM Zorn Directed differentiation of human pluripotent stem cells into diverse organ-specific mesenchyme of the digestive and respiratory systems Nature Protocols, 2022-08-17;0(0):. 2022-08-17 [PMID: 35978039] (Cell Culture, Human) |
Cell Culture |
Human |
M Kuwahara, Y Akasaki, N Goto, I Kurakazu, T Sueishi, M Toya, T Uchida, T Tsutsui, R Hirose, H Tsushima, Y Nakashima Fluvastatin promotes chondrogenic differentiation of adipose-derived mesenchymal stem cells by inducing bone morphogenetic protein 2 Bmc Pharmacology & Toxicology, 2022-08-09;23(1):61. 2022-08-09 [PMID: 35945639] (Bioassay, Human) |
Bioassay |
Human |
E Akrioti, T Karamitros, P Gkaravelas, G Kouroupi, R Matsas, E Taoufik Early Signs of Molecular Defects in iPSC-Derived Neural Stems Cells from Patients with Familial Parkinson's Disease Biomolecules, 2022-06-23;12(7):. 2022-06-23 [PMID: 35883433] (Bioassay, Human) |
Bioassay |
Human |
KJ Ng, J Lim, YN Tan, D Quek, Z Lim, N Pantelirei, C Clavel Sox2 in the dermal papilla regulates hair follicle pigmentation Oncogene, 2022-07-19;40(3):111100. 2022-07-19 [PMID: 35858560] (In Vivo, Mouse) |
In Vivo |
Mouse |
RE Thompson, MA Meyers, DNR Veeramacha, BS Pukazhenth, FK Hollinshea Equine Oviductal Organoid Generation and Cryopreservation Methods and protocols, 2022-06-15;5(3):. 2022-06-15 [PMID: 35736552] (Bioassay, Equine) |
Bioassay |
Equine |
M Ohgushi, N Taniyama, A Vandenbon, M Eiraku Delamination of trophoblast-like syncytia from the amniotic ectodermal analogue in human primed embryonic stem cell-based differentiation model Cell Reports, 2022-06-21;39(12):110973. 2022-06-21 [PMID: 35732132] (Bioassay, Human) |
Bioassay |
Human |
YH Go, WH Choi, WJ Bae, SI Jung, CH Cho, SA Lee, JS Park, JM Ahn, SW Kim, KJ Lee, D Lee, J Yoo Modeling Pancreatic Cancer with Patient-Derived Organoids Integrating Cancer-Associated Fibroblasts Cancers, 2022-04-21;14(9):. 2022-04-21 [PMID: 35565206] (Bioassay, Human) |
Bioassay |
Human |
S Ding, C Hsu, Z Wang, NR Natesh, R Millen, M Negrete, N Giroux, GO Rivera, A Dohlman, S Bose, T Rotstein, K Spiller, A Yeung, Z Sun, C Jiang, R Xi, B Wilkin, PM Randon, I Williamson, DA Nelson, D Delubac, S Oh, G Rupprecht, J Isaacs, J Jia, C Chen, JP Shen, S Kopetz, S McCall, A Smith, N Gjorevski, AC Walz, S Antonia, E Marrer-Ber, H Clevers, D Hsu, X Shen Patient-derived micro-organospheres enable clinical precision oncology Cell Stem Cell, 2022-05-03;0(0):. 2022-05-03 [PMID: 35508177] (Bioassay, Human) |
Bioassay |
Human |
JM Suárez-Riv, CJ Pastor-Mal, A Romero-Gon, D Gómez-Fern, S Povea-Cabe, M Álvarez-Có, I Villalón-G, M Talaverón-, A Suárez-Car, M Munuera-Ca, JA Sánchez-Al Pterostilbene in Combination With Mitochondrial Cofactors Improve Mitochondrial Function in Cellular Models of Mitochondrial Diseases Frontiers in Pharmacology, 2022-03-18;13(0):862085. 2022-03-18 [PMID: 35370630] (Bioassay, Human) |
Bioassay |
Human |
S Kim, S Min, YS Choi, SH Jo, JH Jung, K Han, J Kim, S An, YW Ji, YG Kim, SW Cho Tissue extracellular matrix hydrogels as alternatives to Matrigel for culturing gastrointestinal organoids Nature Communications, 2022-03-30;13(1):1692. 2022-03-30 [PMID: 35354790] (Bioassay, Human) |
Bioassay |
Human |
J Zhou, H He, JJ Zhang, X Liu, W Yao, C Li, T Xu, SY Yin, DY Wu, CL Dou, Q Li, J Xiang, WJ Xiong, LY Wang, JM Tang, Z Xue, X Zhang, YL Miao ATG7-mediated autophagy facilitates embryonic stem cell exit from naive pluripotency and marks commitment to differentiation Autophagy, 2022-04-10;0(0):. 2022-04-10 [PMID: 35311460] (Bioassay, Human) |
Bioassay |
Human |
K Uehara, M Koyanagi-A, T Koide, T Itoh, T Aoi Epithelial-derived factors induce muscularis mucosa of human induced pluripotent stem cell-derived gastric organoids Stem Cell Reports, 2022-03-03;0(0):. 2022-03-03 [PMID: 35245440] (Bioassay, Human) |
Bioassay |
Human |
K Zhao, Y Shi, J Yu, L Yu, A Mael, Y Li, A Kolton, T Joyce, J Odorico, PO Berggren, SN Yang Intracameral Microimaging of Maturation of Human iPSC Derivatives into Islet Endocrine Cells Cell Transplantation, 2022-01-01;31(0):9636897211066. 2022-01-01 [PMID: 35156411] (Bioassay, Human) |
Bioassay |
Human |
S Vachenc, J Gobbo, SE Moujarrebe, I Desmoulins, M Gilabert, M Beau-Falle, E Mitry, N Girard, A Bertaut, N Dusetti, JL Iovanna, R Yousfi, F Pierrat, R Bruno, A Cueff, R Boidot, P Genne OncoSNIPE� Study Protocol, a study of molecular profiles associated with development of resistance in solid cancer patients BMC Cancer, 2022-01-06;22(1):41. 2022-01-06 [PMID: 34991520] (Bioassay, Human) |
Bioassay |
Human |
N Yucer, R Ahdoot, MJ Workman, AH Laperle, MS Recouvreux, K Kurowski, DJ Naboulsi, V Liang, Y Qu, JT Plummer, SA Gayther, S Orsulic, BY Karlan, CN Svendsen Human iPSC-derived fallopian tube organoids with BRCA1 mutation recapitulate early-stage carcinogenesis Cell Reports, 2021-12-28;37(13):110146. 2021-12-28 [PMID: 34965417] (Bioassay, Human) |
Bioassay |
Human |
A Bruzelius, S Kidnapilla, J Drouin-Oue, T Stoker, RA Barker, D Rylander O Reprogramming Human Adult Fibroblasts into GABAergic Interneurons Cells, 2021-12-08;10(12):. 2021-12-08 [PMID: 34943958] (Bioassay, Human) |
Bioassay |
Human |
R Sharma, A George, M Nimmagadda, D Ortolan, BS Karla, Z Qureshy, D Bose, R Dejene, G Liang, Q Wan, J Chang, BS Jha, O Memon, KJ Miyagishim, A Rising, M Lal, E Hanson, R King, MM Campos, M Ferrer, J Amaral, D McGaughey, K Bharti Epithelial phenotype restoring drugs suppress macular degeneration phenotypes in an iPSC model Nature Communications, 2021-12-15;12(1):7293. 2021-12-15 [PMID: 34911940] (Bioassay, Human) |
Bioassay |
Human |
V Chesnokova, S Zonis, A Apostolou, HQ Estrada, S Knott, K Wawrowsky, K Michelsen, A Ben-Shlomo, R Barrett, V Gorbunova, K Karalis, S Melmed Local non-pituitary growth hormone is induced with aging and facilitates epithelial damage Cell Reports, 2021-12-14;37(11):110068. 2021-12-14 [PMID: 34910915] (Bioassay, Human) |
Bioassay |
Human |
R Nicolle, O Gayet, M Bigonnet, J Roques, B Chanez, F Puleo, J Augustin, JF Emile, M Svrcek, T Arsenijevi, P Hammel, V Rebours, M Giovannini, P Grandval, L Dahan, V Moutardier, E Mitry, JL Van Laethe, JB Bachet, J Cros, J Iovanna, NJ Dusetti Relevance of biopsy-derived pancreatic organoids in the development of efficient transcriptomic signatures to predict adjuvant chemosensitivity in pancreatic cancer Translational Oncology, 2021-12-11;16(0):101315. 2021-12-11 [PMID: 34906890] (Bioassay, Human) |
Bioassay |
Human |
AK Eicher, DO Kechele, N Sundaram, HM Berns, HM Poling, LE Haines, JG Sanchez, K Kishimoto, M Krishnamur, L Han, AM Zorn, MA Helmrath, JM Wells Functional human gastrointestinal organoids can be engineered from three primary germ layers derived separately from pluripotent stem cells Cell Stem Cell, 2021-12-01;0(0):. 2021-12-01 [PMID: 34856121] (Bioassay, Human) |
Bioassay |
Human |
B Orr, K Sutton, S Christian, T Nash, H Niemann, LL Hansen, MJ McGrew, SR Jensen, L Vervelde Novel chicken two-dimensional intestinal model comprising all key epithelial cell types and a mesenchymal sub-layer Veterinary research, 2021-11-24;52(1):142. 2021-11-24 [PMID: 34819162] (Bioassay, Chicken) |
Bioassay |
Chicken |
T Bai, CY Peng, I Aneas, N Sakabe, DF Requena, C Billstrand, M Nobrega, C Ober, M Parast, JA Kessler Establishment of human induced trophoblast stem-like cells from term villous cytotrophoblasts Stem Cell Research, 2021-08-19;56(0):102507. 2021-08-19 [PMID: 34454392] (Bioassay, Human) |
Bioassay |
Human |
S Hellman Generation of equine enteroids and enteroid-derived 2D monolayers that are responsive to microbial mimics Veterinary research, 2021-08-14;52(1):108. 2021-08-14 [PMID: 34391473] (Bioassay, Equine) |
Bioassay |
Equine |
M Ali, SY Khan, JD Gottsch, EK Hutchinson, A Khan, SA Riazuddin Pluripotent stem cell-derived corneal endothelial cells as an alternative to donor corneal endothelium in keratoplasty Stem Cell Reports, 2021-08-05;0(0):. 2021-08-05 [PMID: 34358452] (Bioassay, Human) |
Bioassay |
Human |
BM Larsen, M Kannan, LF Langer, BD Leibowitz, A Bentaieb, A Cancino, I Dolgalev, BE Drummond, JR Dry, CS Ho, G Khullar, BA Krantz, B Mapes, KE McKinnon, J Metti, JF Perera, TA Rand, V Sanchez-Fr, JM Shaxted, MM Stein, MA Streit, YC Tan, Y Zhang, E Zhao, J Venkataram, MC Stumpe, JA Borgia, A Masood, DVT Catenacci, JV Mathews, DB Gursel, JJ Wei, TH Welling, DM Simeone, KP White, AA Khan, C Igartua, AA Salahudeen A pan-cancer organoid platform for precision medicine Cell Reports, 2021-07-27;36(4):109429. 2021-07-27 [PMID: 34320344] (Bioassay, Human) |
Bioassay |
Human |
B Vermeire, LM Gonzalez, RJJ Jansens, E Cox, B Devriendt Porcine small intestinal organoids as a model to explore ETEC-host interactions in the gut Veterinary research, 2021-06-26;52(1):94. 2021-06-26 [PMID: 34174960] (Bioassay, Porcine) |
Bioassay |
Porcine |
O Hoare, N Fraunhoffe, A Elkaoutari, O Gayet, M Bigonnet, J Roques, R Nicolle, C McGuckin, N Forraz, E Sohier, L Tonon, P Wajda, S Boyault, V Attignon, S Tabone-Egl, S Barbier, C Mignard, O Duchamp, J Iovanna, NJ Dusetti Exploring the Complementarity of Pancreatic Ductal Adenocarcinoma Preclinical Models Cancers, 2021-05-19;13(10):. 2021-05-19 [PMID: 34069519] (Bioassay, Human) |
Bioassay |
Human |
H Nakashima, K Tsujimura, K Irie, T Imamura, CA Trujillo, M Ishizu, M Uesaka, M Pan, H Noguchi, K Okada, K Aoyagi, T Andoh-Noda, H Okano, AR Muotri, K Nakashima MeCP2 controls neural stem cell fate specification through miR-199a-mediated inhibition of BMP-Smad signaling Cell Reports, 2021-05-18;35(7):109124. 2021-05-18 [PMID: 34010654] (Bioassay, Human) |
Bioassay |
Human |
MDA Norman, SA Ferreira, GM Jowett, L Bozec, E Gentleman Measuring the elastic modulus of soft culture surfaces and three-dimensional hydrogels using atomic force microscopy Nature Protocols, 2021-04-14;0(0):. 2021-04-14 [PMID: 33854255] (Bioassay, Human) |
Bioassay |
Human |
N Brookhouse, S Raman, C Frisch, G Srinivasan, DA Brafman APOE2 mitigates disease-related phenotypes in an isogenic hiPSC-based model of Alzheimer's disease Molecular Psychiatry, 2021-04-09;0(0):. 2021-04-09 [PMID: 33837271] (Bioassay, Human) |
Bioassay |
Human |
V Haellman, P Saxena, Y Jiang, M Fussenegge Rational design and optimization of synthetic gene switches for controlling cell-fate decisions in pluripotent stem cells Metabolic engineering, 2021-03-17;65(0):99-110. 2021-03-17 [PMID: 33744461] (Bioassay, N/A) |
Bioassay |
N/A |
K Husain, D Coppola, CS Yang, MP Malafa Farnesyl dimethyl chromanol targets colon cancer stem cells and prevents colorectal cancer metastasis Scientific Reports, 2021-01-26;11(1):2185. 2021-01-26 [PMID: 33500430] (Bioassay, Human) |
Bioassay |
Human |
A Merlevede, EM Legault, V Drugge, RA Barker, J Drouin-Oue, V Olariu A quantitative model of cellular decision making in direct neuronal reprogramming Scientific Reports, 2021-01-15;11(1):1514. 2021-01-15 [PMID: 33452356] (Bioassay, Human) |
Bioassay |
Human |
SK Sarvestani, S Signs, B Hu, Y Yeu, H Feng, Y Ni, DR Hill, RC Fisher, S Ferrandon, RK DeHaan, J Stiene, M Cruise, TH Hwang, X Shen, JR Spence, EH Huang Induced organoids derived from patients with ulcerative colitis recapitulate colitic reactivity Nature Communications, 2021-01-11;12(1):262. 2021-01-11 [PMID: 33431859] (Bioassay, Human) |
Bioassay |
Human |
MJ Workman, E Troisi, SR Targan, CN Svendsen, RJ Barrett Modeling Intestinal Epithelial Response to Interferon-&gamma in Induced Pluripotent Stem Cell-Derived Human Intestinal Organoids International Journal of Molecular Sciences, 2020-12-30;22(1):. 2020-12-30 [PMID: 33396621] (Bioassay, Human) |
Bioassay |
Human |
S Forostyak, O Forostyak, JCF Kwok, N Romanyuk, M Rehorova, J Kriska, G Dayanithi, R Raha-Chowd, P Jendelova, M Anderova, JW Fawcett, E Sykova Transplantation of Neural Precursors Derived from Induced Pluripotent Cells Preserve Perineuronal Nets and Stimulate Neural Plasticity in ALS Rats International Journal of Molecular Sciences, 2020-12-16;21(24):. 2020-12-16 [PMID: 33339362] (Cell Culture, Human) |
Cell Culture |
Human |
Y Zheng, Y Shao, J Fu A microfluidics-based stem cell model of early post-implantation human development Nature Protocols, 2020-12-11;0(0):. 2020-12-11 [PMID: 33311712] (Bioassay, Human) |
Bioassay |
Human |
J Meisig, N Dreser, M Kapitza, M Henry, T Rotshteyn, J Rahnenführ, JG Hengstler, A Sachinidis, T Waldmann, M Leist, N Blüthgen Kinetic modeling of stem cell transcriptome dynamics to identify regulatory modules of normal and disturbed neuroectodermal differentiation Nucleic Acids Res, 2020-12-16;0(0):. 2020-12-16 [PMID: 33245762] (Cell Culture, Human) |
Cell Culture |
Human |
AB Caldwell, Q Liu, GP Schroth, DR Galasko, SH Yuan, SL Wagner, S Subramania Dedifferentiation and neuronal repression define familial Alzheimer's disease Sci Adv, 2020-11-13;6(46):. 2020-11-13 [PMID: 33188013] (Bioassay, Human) |
Bioassay |
Human |
J Giacomoni, A Bruzelius, CA Stamouli, D Rylander O Direct Conversion of Human Stem Cell-Derived Glial Progenitor Cells into GABAergic Interneurons Cells, 2020-11-10;9(11):. 2020-11-10 [PMID: 33182669] (Bioassay, Human) |
Bioassay |
Human |
A Di Grazia, I Marafini, G Pedini, D Di Fusco, F Laudisi, V Dinallo, E Rosina, C Stolfi, E Franzè, P Sileri, G Sica, G Monteleone, C Bagni, I Monteleone The Fragile X Mental Retardation Protein regulates RIP1K and colorectal cancer resistance to necroptosis Cell Mol Gastroenterol Hepatol, 2020-10-19;0(0):. 2020-10-19 [PMID: 33091622] (Bioassay, Human) |
Bioassay |
Human |
S Nolbrant, J Giacomoni, DB Hoban, A Bruzelius, M Birtele, D Chandler-M, M Pereira, DR Ottosson, SA Goldman, M Parmar Direct Reprogramming of Human Fetal- and Stem Cell-Derived Glial Progenitor Cells into Midbrain Dopaminergic Neurons Stem Cell Reports, 2020-09-24;0(0):. 2020-09-24 [PMID: 32976765] (Bioassay, Human) |
Bioassay |
Human |
K Lloyd, S Papoutsopo, E Smith, P Stegmaier, F Bergey, L Morris, M Kittner, H England, D Spiller, MHR White, CA Duckworth, BJ Campbell, V Poroikov, VAP Martins Do, A Kel, W Muller, DM Pritchard, C Probert, MD Burkitt, SysmedIBD Using systems medicine to identify a therapeutic agent with potential for repurposing in inflammatory bowel disease Dis Model Mech, 2020-11-27;0(0):. 2020-11-27 [PMID: 32958515] (Bioassay, Human) |
Bioassay |
Human |
L Han, P Chaturvedi, K Kishimoto, H Koike, T Nasr, K Iwasawa, K Giesbrecht, PC Witcher, A Eicher, L Haines, Y Lee, JM Shannon, M Morimoto, JM Wells, T Takebe, AM Zorn Single cell transcriptomics identifies a signaling network coordinating endoderm and mesoderm diversification during foregut organogenesis Nat Commun, 2020-08-27;11(1):4158. 2020-08-27 [PMID: 32855417] (Bioassay, Human) |
Bioassay |
Human |
L Zhang, J Avery, A Yin, AM Singh, TS Cliff, H Yin, S Dalton Generation of Functional Brown Adipocytes from Human Pluripotent Stem Cells via Progression through a Paraxial Mesoderm State Cell Stem Cell, 2020-08-11;0(0):. 2020-08-11 [PMID: 32783886] (Bioassay, Human) |
Bioassay |
Human |
P Teotia, M Niu, I Ahmad Mapping developmental trajectories and subtype diversity of normal and glaucomatous human retinal ganglion cells by single-cell transcriptome analysis Stem Cells, 2020-06-18;0(0):. 2020-06-18 [PMID: 32557945] (Bioassay, Human) |
Bioassay |
Human |
Kumar Gupta A, Sarkar P, Wertheim J, Pan X, Carroll T, Oxburgh L Asynchronous mixing of kidney progenitor cells potentiates nephrogenesis in organoids. Commun Biol, 2020-05-11;3(1):231. 2020-05-11 [PMID: 32393756] (Bioassay, Human) |
Bioassay |
Human |
NK Vinckier, NA Patel, RJ Geusz, A Wang, J Wang, I Matta, AR Harrington, M Wortham, N Wetton, J Wang, US Jhala, MG Rosenfeld, CW Benner, HP Shih, M Sander LSD1-mediated enhancer silencing attenuates retinoic acid signalling during pancreatic endocrine cell development Nat Commun, 2020-04-29;11(1):2082. 2020-04-29 [PMID: 32350257] (Bioassay, Human) |
Bioassay |
Human |
A Gunne-Brad, A Sullivan, B Gharibi, RSM Sheriff, A Maity, YF Wang, A Edwards, M Jiang, M Howell, R Goldstone, R Wollman, P East, SDM Santos GATA3 Mediates a Fast, Irreversible Commitment to BMP4-Driven Differentiation in Human Embryonic Stem Cells Cell Stem Cell, 2020-04-16;26(5):693-706.e9. 2020-04-16 [PMID: 32302522] (Cell Culture, Human) |
Cell Culture |
Human |
S Yoshida, H Miwa, T Kawachi, S Kume, K Takahashi Generation of intestinal organoids derived from human pluripotent stem cells for drug testing Sci Rep, 2020-04-06;10(1):5989. 2020-04-06 [PMID: 32249832] (Bioassay, Human) |
Bioassay |
Human |
Y Liu, AE Michalska, M Dottori, E Eaton, JM Courtney, A Antonic, DW Howells Differential susceptibility of human neural progenitors and neurons to ischaemic injury Brain Res. Bull., 2019-12-16;156(0):25-32. 2019-12-16 [PMID: 31837459] (Bioassay, Human) |
Bioassay |
Human |
T Hyakumura, S McDougall, S Finch, K Needham, M Dottori, BA Nayagam Organotypic Cocultures of Human Pluripotent Stem Cell Derived-Neurons with Mammalian Inner Ear Hair Cells and Cochlear Nucleus Slices Stem Cells Int, 2019-11-20;2019(0):8419493. 2019-11-20 [PMID: 31827535] (Bioassay, Human) |
Bioassay |
Human |
J Piccand, C Vagne, F Blot, A Meunier, A Beucher, P Strasser, ML Lund, S Ghimire, L Nivlet, C Lapp, N Petersen, MS Engelstoft, C Thibault-C, C Keime, SJ Correa, V Schreiber, N Molina, TW Schwartz, A De Arcange, G Gradwohl Rfx6 promotes the differentiation of peptide-secreting enteroendocrine cells while�repressing genetic programs controlling�serotonin production Mol Metab, 2019-08-13;29(0):24-39. 2019-08-13 [PMID: 31668390] (Bioassay, Mouse) |
Bioassay |
Mouse |
W Liang, P Han, EH Kim, J Mak, R Zhang, AG Torrente, JI Goldhaber, E Marbán, HC Cho Canonical Wnt signaling promotes pacemaker cell specification of cardiac mesodermal cells derived from mouse and human embryonic stem cells Stem Cells, 2019-12-30;0(0):. 2019-12-30 [PMID: 31648393] (Bioassay, Human) |
Bioassay |
Human |
A Tripathi, C Volsko, JP Garcia, E Agirre, KC Allan, PJ Tesar, BD Trapp, G Castelo-Br, FJ Sim, R Dutta Oligodendrocyte Intrinsic miR-27a Controls Myelination and Remyelination Cell Rep, 2019-10-22;29(4):904-919.e9. 2019-10-22 [PMID: 31644912] (Bioassay, Mouse) |
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Mouse |
M Omi, V Kaartinen, Y Mishina Activin A receptor type 1-mediated BMP signaling regulates RANKL-induced osteoclastogenesis via canonical SMAD signaling pathway J. Biol. Chem., 2019-10-16;0(0):. 2019-10-16 [PMID: 31619522] (Bioassay, Mouse) |
Bioassay |
Mouse |
T Yung, F Poon, M Liang, S Coquenlorg, EC McGaugh, CC Hui, MD Wilson, MC Nostro, TH Kim Sufu- and Spop-mediated downregulation of Hedgehog signaling promotes beta cell differentiation through organ-specific niche signals Nat Commun, 2019-10-11;10(1):4647. 2019-10-11 [PMID: 31604927] (Bioassay, Human) |
Bioassay |
Human |
R Sachdeva, M Wu, K Johnson, H Kim, A Celebre, U Shahzad, MS Graham, JA Kessler, JH Chuang, J Karamchand, M Bredel, R Verhaak, S Das BMP signaling mediates glioma stem cell quiescence and confers treatment resistance in glioblastoma Sci Rep, 2019-10-10;9(1):14569. 2019-10-10 [PMID: 31602000] (Tissue Culture, Human) |
Tissue Culture |
Human |
V Veschi, LR Mangiapane, A Nicotra, S Di Franco, E Scavo, T Apuzzo, DS Sardina, M Fiori, A Benfante, ML Colorito, G Cocorullo, F Giuliante, C Cipolla, G Pistone, MR Bongiorno, A Rizzo, CM Tate, X Wu, S Rowlinson, LF Stancato, M Todaro, R De Maria, G Stassi Targeting chemoresistant colorectal cancer via systemic administration of a BMP7 variant Oncogene, 2019-10-07;0(0):. 2019-10-07 [PMID: 31591478] (Bioassay, Human) |
Bioassay |
Human |
V Lungova, X Chen, Z Wang, C Kendziorsk, SL Thibeault Human induced pluripotent stem cell-derived vocal fold mucosa mimics development and responses to smoke exposure Nat Commun, 2019-09-24;10(1):4161. 2019-09-24 [PMID: 31551422] (Bioassay, Human) |
Bioassay |
Human |
Y Zheng, X Xue, Y Shao, S Wang, SN Esfahani, Z Li, JM Muncie, JN Lakins, VM Weaver, DL Gumucio, J Fu Controlled modelling of human epiblast and amnion development using stem cells Nature, 2019-09-11;573(7774):421-425. 2019-09-11 [PMID: 31511693] (Bioassay, Human) |
Bioassay |
Human |
K Shik Mun, K Arora, Y Huang, F Yang, S Yarlagadda, Y Ramananda, M Abu-El-Hai, JJ Palermo, BN Appakalai, JD Nathan, AP Naren Patient-derived pancreas-on-a-chip to model cystic fibrosis-related disorders Nat Commun, 2019-07-16;10(1):3124. 2019-07-16 [PMID: 31311920] (Cell Culture, Human) |
Cell Culture |
Human |
KB Jung, O Kwon, MO Lee, H Lee, YS Son, O Habib, JH Oh, HS Cho, CR Jung, J Kim, MY Son Blockade of STAT3 Causes Severe In Vitro and In Vivo Maturation Defects in Intestinal Organoids Derived from Human Embryonic Stem Cells J Clin Med, 2019-07-04;8(7):. 2019-07-04 [PMID: 31277507] (Bioassay, Human) |
Bioassay |
Human |
JE Ahlfors, A Azimi, R El-Ayoubi, A Velumian, I Vonderwald, C Boscher, O Mihai, S Mani, M Samoilova, M Khazaei, MG Fehlings, CM Morshead Examining the fundamental biology of a novel population of directly reprogrammed human neural precursor cells Stem Cell Res Ther, 2019-06-13;10(1):166. 2019-06-13 [PMID: 31196173] (Bioassay, Human) |
Bioassay |
Human |
C Markouli, EC De Deckers, M Regin, HT Nguyen, F Zambelli, A Keller, D Dziedzicka, J De Kock, L Tilleman, F Van Nieuwe, L Franceschi, K Sermon, M Geens, C Spits Gain of 20q11.21 in Human Pluripotent Stem Cells Impairs TGF-?-Dependent Neuroectodermal Commitment Stem Cell Reports, 2019-06-06;13(1):163-176. 2019-06-06 [PMID: 31178415] (Bioassay, Human) |
Bioassay |
Human |
AP Marshall, W Luo, XL Wang, T Lin, Y Cai, RJ Guzman Medial artery calcification increases neointimal hyperplasia after balloon injury Sci Rep, 2019-06-03;9(1):8193. 2019-06-03 [PMID: 31160618] (Bioassay, Rat) |
Bioassay |
Rat |
AM Blázquez-M, M Jumabay, P Rajbhandar, T Sallam, Y Guo, J Yao, L Vergnes, K Reue, L Zhang, Y Yao, AM Fogelman, P Tontonoz, AJ Lusis, X Wu, KI Boström Noggin depletion in adipocytes promotes obesity in mice Mol Metab, 2019-04-10;0(0):. 2019-04-10 [PMID: 31027994] (Bioassay, Mouse) |
Bioassay |
Mouse |
X Wang, M Sterr, Ansarullah, I Burtscher, A Böttcher, J Beckenbaue, J Siehler, T Meitinger, HU Häring, H Staiger, FM Cernilogar, G Schotta, M Irmler, J Beckers, CVE Wright, M Bakhti, H Lickert Point mutations in the PDX1 transactivation domain impair human ?-cell development and function Mol Metab, 2019-03-20;0(0):. 2019-03-20 [PMID: 30930126] (Differentiation, Differentiation, Human) |
Differentiation, Differentiation |
Human |
M Iwashita, H Ohta, T Fujisawa, M Cho, M Ikeya, S Kidoaki, Y Kosodo Brain-stiffness-mimicking tilapia collagen gel promotes the induction of dorsal cortical neurons from human pluripotent stem cells Sci Rep, 2019-02-28;9(1):3068. 2019-02-28 [PMID: 30816128] (Bioassay, Human) |
Bioassay |
Human |
V Chesnokova, S Zonis, R Barrett, H Kameda, K Wawrowsky, A Ben-Shlomo, M Yamamoto, J Gleeson, C Bresee, V Gorbunova, S Melmed Excess growth hormone suppresses DNA damage repair in epithelial cells JCI Insight, 2019-02-07;4(3):. 2019-02-07 [PMID: 30728323] (Bioassay, Human) |
Bioassay |
Human |
AJ Miller, BR Dye, D Ferrer-Tor, DR Hill, AW Overeem, LD Shea, JR Spence Generation of lung organoids from human pluripotent stem cells in vitro Nat Protoc, 2019-02-01;14(2):518-540. 2019-02-01 [PMID: 30664680] (Bioassay, Human) |
Bioassay |
Human |
J Ruzicka, N Romanyuk, K Jirakova, A Hejcl, O Janouskova, LU Machova, M Bochin, M Pradny, L Vargova, P Jendelova The Effect of iPS-Derived Neural Progenitors Seeded on Laminin-Coated pHEMA-MOETACl Hydrogel with Dual Porosity in a Rat Model of Chronic Spinal Cord Injury Cell Transplant, 2019-01-18;0(0):9636897188237. 2019-01-18 [PMID: 30654639] (Bioassay, Human) |
Bioassay |
Human |
AR Field, FMJ Jacobs, IT Fiddes, APR Phillips, AM Reyes-Orti, E LaMontagne, L Whitehead, V Meng, JL Rosenkrant, M Olsen, M Hauessler, S Katzman, SR Salama, D Haussler Structurally Conserved Primate LncRNAs Are Transiently Expressed during Human Cortical Differentiation and Influence Cell-Type-Specific Genes Stem Cell Reports, 2019-01-10;12(2):245-257. 2019-01-10 [PMID: 30639214] (Bioassay, Human, Primate - Macaca mulatta (Rhesus Macaque), Primate - Pan troglodytes (Chimpanzee), Primate - Pongo (Orangutan)) |
Bioassay |
Human, Primate - Macaca mulatta (Rhesus Macaque), Primate - Pan troglodytes (Chimpanzee), Primate - Pongo (Orangutan) |
STJ Bradford, EJ Ranghini, E Grimley, PH Lee, GR Dressler High-throughput screens for agonists of bone morphogenetic protein (BMP) signaling identify potent benzoxazole compounds J. Biol. Chem., 2019-01-02;0(0):. 2019-01-02 [PMID: 30602563] (Bioassay, Human) |
Bioassay |
Human |
MA Scavuzzo, J Chmielowie, D Yang, K Wamble, LS Chaboub, L Duraine, B Tepe, SM Glasgow, BR Arenkiel, C Brou, B Deneen, M Borowiak Pancreatic Cell Fate Determination Relies on Notch Ligand Trafficking by NFIA Cell Rep, 2018-12-26;25(13):3811-3827.e7. 2018-12-26 [PMID: 30590051] (Bioassay, Human) |
Bioassay |
Human |
C Bonamy, E Sechet, A Amiot, A Alam, M Mourez, L Fraisse, PJ Sansonetti, B Sperandio Expression of the human antimicrobial peptide ?-defensin-1 is repressed by the EGFR-ERK-MYC axis in colonic epithelial cells Sci Rep, 2018-12-21;8(1):18043. 2018-12-21 [PMID: 30575780] (Bioassay, Human) |
Bioassay |
Human |
J Li, C Narayanan, J Bian, D Sambo, T Brickler, W Zhang, S Chetty A transient DMSO treatment increases the differentiation potential of human pluripotent stem cells through the Rb family PLoS ONE, 2018-12-12;13(12):e0208110. 2018-12-12 [PMID: 30540809] (Bioassay, Human) |
Bioassay |
Human |
TR Broda, KW McCracken, JM Wells Generation of human antral and fundic gastric organoids from pluripotent stem cells Nat Protoc, 2019-01-01;14(1):28-50. 2019-01-01 [PMID: 30470820] (Bioassay, Human) |
Bioassay |
Human |
N Bayó-Puxan, AP Terrasso, S Creyssels, D Simão, C Begon-Pesc, M Lavigne, S Salinas, F Bernex, A Bosch, V Kalatzis, T Levade, AM Cuervo, P Lory, A Consiglio, C Brito, EJ Kremer Lysosomal and network alterations in human mucopolysaccharidosis type VII iPSC-derived neurons Sci Rep, 2018-11-09;8(1):16644. 2018-11-09 [PMID: 30413728] (Bioassay, Human) |
Bioassay |
Human |
A Buskin, L Zhu, V Chichagova, B Basu, S Mozaffari-, D Dolan, A Droop, J Collin, R Bronstein, S Mehrotra, M Farkas, G Hilgen, K White, KT Pan, A Treumann, D Hallam, K Bialas, G Chung, C Mellough, Y Ding, N Krasnogor, S Przyborski, S Zwolinski, J Al-Aama, S Alharthi, Y Xu, G Wheway, K Szymanska, M McKibbin, CF Inglehearn, DJ Elliott, S Lindsay, RR Ali, DH Steel, L Armstrong, E Sernagor, H Urlaub, E Pierce, R Lührmann, SN Grellschei, CA Johnson, M Lako Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa Nat Commun, 2018-10-12;9(1):4234. 2018-10-12 [PMID: 30315276] (Bioassay, Human) |
Bioassay |
Human |
E Sechet, E Telford, C Bonamy, PJ Sansonetti, B Sperandio Natural molecules induce and synergize to boost expression of the human antimicrobial peptide ?-defensin-3 Proc. Natl. Acad. Sci. U.S.A., 2018-10-01;0(0):. 2018-10-01 [PMID: 30275324] (Bioassay, Human) |
Bioassay |
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Y Zhang, Y Yang, M Jiang, SX Huang, W Zhang, D Al Alam, S Danopoulos, M Mori, YW Chen, R Balasubram, SM Chuva de S, C Serra, M Bialecka, E Kim, S Lin, ALR Toste de C, PN Riccio, WV Cardoso, X Zhang, HW Snoeck, J Que 3D Modeling of Esophageal Development using Human PSC-Derived Basal Progenitors Reveals a Critical Role for Notch Signaling Cell Stem Cell, 2018-09-20;0(0):. 2018-09-20 [PMID: 30244870] (Bioassay, Human) |
Bioassay |
Human |
R Cruz-Acuña, M Quirós, S Huang, D Siuda, JR Spence, A Nusrat, AJ García PEG-4MAL hydrogels for human organoid generation, culture, and in vivo delivery Nat Protoc, 2018-09-01;0(0):. 2018-09-01 [PMID: 30190557] (Bioassay, Human) |
Bioassay |
Human |
MA Scavuzzo, MC Hill, J Chmielowie, D Yang, J Teaw, K Sheng, Y Kong, M Bettini, C Zong, JF Martin, M Borowiak Endocrine lineage biases arise in temporally distinct endocrine progenitors during pancreatic morphogenesis Nat Commun, 2018-08-22;9(1):3356. 2018-08-22 [PMID: 30135482] (Bioassay, Human) |
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JD Blair, D Hockemeyer, HS Bateup Genetically engineered human cortical spheroid models of tuberous sclerosis Nat. Med., 2018-08-20;0(0):. 2018-08-20 [PMID: 30127391] (Bioassay, Human) |
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S Haider, G Meinhardt, L Saleh, V Kunihs, M Gamperl, U Kaindl, A Ellinger, TR Burkard, C Fiala, J Pollheimer, S Mendjan, PA Latos, M Knöfler Self-Renewing Trophoblast Organoids Recapitulate the Developmental Program of the Early Human Placenta Stem Cell Reports, 2018-08-02;0(0):. 2018-08-02 [PMID: 30078556] (Bioassay, Human) |
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Y Liu, A Antonic, X Yang, N Korte, K Lim, AE Michalska, M Dottori, DW Howells Derivation of phenotypically diverse neural culture from hESC by combining adherent and dissociation methods J. Neurosci. Methods, 2018-07-06;0(0):. 2018-07-06 [PMID: 30003885] (Bioassay, Human) |
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S Chen, L Jia, S Zhang, Y Zheng, Y Zhou DEPTOR regulates osteogenic differentiation via inhibiting MEG3-mediated activation of BMP4 signaling and is involved in osteoporosis Stem Cell Res Ther, 2018-07-04;9(1):185. 2018-07-04 [PMID: 29973283] (In Vivo, Mouse) |
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KKB Tan, WWM Lim, C Chai, M Kukumberg, KL Lim, ELK Goh, EKF Yim Sequential Application of Discrete Topographical Patterns Enhances Derivation of Functional Mesencephalic Dopaminergic Neurons from Human Induced Pluripotent Stem Cells Sci Rep, 2018-06-22;8(1):9567. 2018-06-22 [PMID: 29934644] (Bioassay, Human) |
Bioassay |
Human |
Michael J Workman, John P Gleeson, Elissa J Troisi, Hannah Q Estrada, S Jordan Kerns, Christopher D Hinojosa, Geraldine A Hamilton, Stephan R Targan, Clive N Svendsen, Robert J Barrett Enhanced Utilization of Induced Pluripotent Stem Cell-Derived Human Intestinal Organoids Using Microengineered Chips. Cellular and Molecular Gastroenterology and Hepatology, 2017-12-29;0(0):2352-345X. 2017-12-29 [PMID: 29930984] (Bioassay, Human) |
Bioassay |
Human |
F Zambelli, J Mertens, D Dziedzicka, J Sterckx, C Markouli, A Keller, P Tropel, L Jung, S Viville, H Van de Vel, M Geens, S Seneca, K Sermon, C Spits Random Mutagenesis, Clonal Events, and Embryonic or Somatic Origin Determine the mtDNA Variant Type and Load in Human Pluripotent Stem�Cells Stem Cell Reports, 2018-06-14;0(0):. 2018-06-14 [PMID: 29910126] (Bioassay, Human) |
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I Espuny-Cam, KA Michelsen, D Linaro, A Bilheu, S Acosta-Ver, A Herpoel, M Giugliano, A Gaillard, P Vanderhaeg Human Pluripotent Stem-Cell-Derived Cortical Neurons Integrate Functionally into the Lesioned Adult Murine Visual Cortex in an Area-Specific Way Cell Rep, 2018-05-29;23(9):2732-2743. 2018-05-29 [PMID: 29847802] (Bioassay, Human) |
Bioassay |
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GM D'Abaco, C Mattei, B Nasr, EJ Hudson, AJ Alshawaf, G Chana, IP Everall, B Nayagam, M Dottori, E Skafidas Graphene foam as a biocompatible scaffold for culturing human neurons R Soc Open Sci, 2018-03-07;5(3):171364. 2018-03-07 [PMID: 29657752] (Bioassay, Human) |
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M Amin, Y Kushida, S Wakao, M Kitada, K Tatsumi, M Dezawa Cardiotrophic Growth Factor-Driven Induction of Human Muse Cells Into Cardiomyocyte-Like Phenotype Cell Transplant, 2018-02-01;27(2):285-298. 2018-02-01 [PMID: 29637816] (Bioassay, Human) |
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EE Alexeev, JM Lanis, DJ Kao, EL Campbell, CJ Kelly, KD Battista, ME Gerich, BR Jenkins, ST Walk, DJ Kominsky, SP Colgan Microbiota-Derived Indole Metabolites Promote Human and Murine Intestinal Homeostasis through Regulation of Interleukin-10 Receptor Am. J. Pathol., 2018-02-16;0(0):. 2018-02-16 [PMID: 29454749] (Bioassay, Human) |
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VM Jovanovic, A Salti, H Tilleman, K Zega, MM Jukic, H Zou, RH Friedel, N Prakash, S Blaess, F Edenhofer, C Brodski BMP/SMAD pathway promotes neurogenesis of midbrain dopaminergic neurons in vivo and in human induced pluripotent and neural stem cells J. Neurosci., 2018-01-10;0(0):. 2018-01-10 [PMID: 29321139] (Human) |
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N Avaliani, U Pfisterer, A Heuer, M Parmar, M Kokaia, M Andersson Directly Converted Human Fibroblasts Mature to Neurons and Show Long-Term Survival in Adult Rodent Hippocampus Stem Cells Int, 2017-11-26;2017(0):5718608. 2017-11-26 [PMID: 29317869] (Bioassay, Human) |
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KE Tumelty, N Higginson-, X Fan, P Bajaj, KM Knowlton, M Shamashkin, AJ Coyle, W Lu, SP Berasi Identification of direct negative crosstalk between the SLIT2 and Bone Morphogenetic Protein-Gremlin signaling pathways J. Biol. Chem., 2018-01-09;0(0):. 2018-01-09 [PMID: 29317497] (Bioassay, Mouse) |
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E Harper, KD Rochfort, H Forde, C Davenport, D Smith, PM Cummins TRAIL attenuates RANKL-mediated osteoblastic signalling in vascular cell mono-culture and co-culture models PLoS ONE, 2017-11-16;12(11):e0188192. 2017-11-16 [PMID: 29145460] (Bioassay, Human) |
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KF Cogger, A Sinha, F Sarangi, EC McGaugh, D Saunders, C Dorrell, S Mejia-Guer, Y Aghazadeh, JL Rourke, RA Screaton, M Grompe, PR Streeter, AC Powers, M Brissova, T Kislinger, MC Nostro Glycoprotein 2 is a specific cell surface marker of human pancreatic progenitors Nat Commun, 2017-08-24;8(1):331. 2017-08-24 [PMID: 28835709] (Bioassay, Human) |
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Bioassay |
Human |
Buchholz , David E, Pennington , Britney, Croze , Roxanne, Hinman , Cassidy, Coffey , Peter J, Clegg , Dennis O Rapid and efficient directed differentiation of human pluripotent stem cells into retinal pigmented epithelium. Stem Cells Transl Med, 2013-04-18;2(5):384-93. 2013-04-18 [PMID: 23599499] (Bioassay, Human) |
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Farmer , Jocelyn, Altschaefl , Kate M, O'Shea , K Sue, Miller , David J Activation of the type I interferon pathway is enhanced in response to human neuronal differentiation. PLoS ONE, 2013-03-07;8(3):e58813. 2013-03-07 [PMID: 23505563] (Bioassay, Human) |
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Tucker B, Anfinson K, Mullins R, Stone E, Young M Use of a synthetic xeno-free culture substrate for induced pluripotent stem cell induction and retinal differentiation. Stem Cells Transl Med, 2012-12-27;2(1):16-24. 2012-12-27 [PMID: 23283489] (Bioassay, Human) |
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Brafman D, Phung C, Kumar N, Willert K Regulation of endodermal differentiation of human embryonic stem cells through integrin-ECM interactions. Cell Death Differ, 2012-11-16;20(3):369-81. 2012-11-16 [PMID: 23154389] (Bioassay, Human) |
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Human |
Swapna , Immani, Borodinsky , Laura N Interplay between electrical activity and bone morphogenetic protein signaling regulates spinal neuron differentiation. Proc Natl Acad Sci U S A, 2012-09-18;109(40):16336-41. 2012-09-18 [PMID: 22991474] (Bioassay, Xenopus) |
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Xenopus |
Li Q, Ramirez-Bergeron D, Dunwoodie S, Yang Y Cited2 gene controls pluripotency and cardiomyocyte differentiation of murine embryonic stem cells through Oct4 gene. J Biol Chem, 2012-07-03;287(34):29088-100. 2012-07-03 [PMID: 22761414] (Bioassay, Human) |
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Human |
Maegdefrau U, Arndt S, Kivorski G, Hellerbrand C, Bosserhoff AK Downregulation of hemojuvelin prevents inhibitory effects of bone morphogenetic proteins on iron metabolism in hepatocellular carcinoma. Lab. Invest., 2011-08-22;91(11):1615-23. 2011-08-22 [PMID: 21863061] (Bioassay, Human) |
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Human |
Spence JR, Mayhew CN, Rankin SA Directed differentiation of human pluripotent stem cells into intestinal tissue in vitro. Nature, 2010-12-12;470(7332):105-9. 2010-12-12 [PMID: 21151107] (Bioassay, Human) |
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Human |
Klim JR, Li L, Wrighton PJ A defined glycosaminoglycan-binding substratum for human pluripotent stem cells. Nat. Methods, 2010-11-14;7(12):989-94. 2010-11-14 [PMID: 21076418] (Bioassay, Human) |
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