Measured by its ability to inhibit papain cleavage of a fluorogenic peptide substrate Z-FR-AMC (Catalog # ES009). The IC50 value is <15 nM, as measured under the described conditions.
Source
E. coli-derived mouse Cystatin B protein Met1-Phe98, with an N-terminal Met and 6-His tag
>95%, by SDS-PAGE under reducing conditions and visualized by silver stain
Endotoxin Note
<1.0 EU per 1 μg of the protein by the LAL method.
Applications/Dilutions
Dilutions
Inhibition Activity
Theoretical MW
12 kDa (monomer). Disclaimer note: The observed molecular weight of the protein may vary from the listed predicted molecular weight due to post translational modifications, post translation cleavages, relative charges, and other experimental factors.
SDS-PAGE
13 kDa, reducing conditions
Publications
Read Publication using 1409-PI in the following applications:
Use a manual defrost freezer and avoid repeated freeze-thaw cycles.
6 months from date of receipt, -20 to -70 °C as supplied.
3 months, -20 to -70 °C under sterile conditions after reconstitution.
Buffer
Lyophilized from a 0.2 μm filtered solution in Tris and NaCl.
Purity
>95%, by SDS-PAGE under reducing conditions and visualized by silver stain
Reconstitution Instructions
Reconstitute at 100 μg/mL in sterile 25 mM Tris and 100 mM NaCl, pH 7.5.
Assay Procedure
Activation Buffer: 50 mM Tris, 5 mM DTT, pH 7.0
Assay Buffer: 50 mM Tris, pH 7.0
Recombinant Mouse Cystatin B (rmCystatin B) (Catalog # 1409-PI)
Papain (Sigma, Catalog # P4762)
Substrate: Z-Phe-Arg-AMC (Catalog # ES009), 10 mM stock in DMSO
F16 Black Maxisorp Plate (Nunc, Catalog # 475515)
Fluorescent Plate Reader (Model: SpectraMax Gemini EM by Molecular Devices) or equivalent
Dilute Papain to 100 µg/mL in Activation Buffer.
Incubate at room temperature for 15 minutes.
Prepare a curve of rmCystatin B (MW: 11,991 Da) in Assay Buffer. Make the following serial dilutions: 800, 400, 200, 150, 100, 50, 25 and 12.5 nM.
Dilute activated Papain to 2.4 µg/mL in Assay Buffer.
Combine 20 µL of 2.4 µg/mL Papain with 20 µL of rmCystatin B curve dilutions. Include two controls containing 20 µL Assay Buffer with 20 µL of 2.4 µg/mL Papain.
Incubate at room temperature for 10 minutes.
After incubation, dilute the rmCystatin B curve 5-fold by adding 160 µL of Assay Buffer.
Dilute Substrate to 200 µM in Assay Buffer.
In a plate, load 50 µL of the diluted rmCystatin B curve, and the start the reaction by adding 50 µL of 200 µM Substrate to wells.
Read at excitation and emission wavelengths of 380 nm and 460 nm, respectively, for 5 minutes in kinetic mode.
Derive the 50% inhibition concentration (IC50) value for rmCystatin B by plotting RFU/min (or specific activity) vs. concentration with 4-PL fitting.
The specific activity for Papain at each point may be determined using the following formula (if needed):
Specific Activity (pmol/min/µg) =
Adjusted Vmax* (RFU/min) x Conversion Factor** (pmol/RFU)
amount of enzyme (µg)
*Adjusted for Substrate Blank **Derived using calibration standard 7-Amino, 4-Methyl Coumarin (AMC) (Sigma, Catalog # A-9891).
Per Well:
Papain: 0.012 µg
Substrate: 100 µM
rmCystatin B curve: 40, 20, 10, 7.5, 5, 2.5, 1.25 and 0.625 nM
Notes
This product is produced by and ships from R&D Systems, Inc., a Bio-Techne brand.
Alternate Names for Recombinant Mouse Cystatin B Protein, CF
CPI-B
CST6cystatin B (liver thiol proteinase inhibitor)10STFBcystatin-B
CSTB
cystatin B (stefin B)
Cystatin B
EPM1
Liver thiol proteinase inhibitor
PME
Stefin B
stefin-B
Background
Cystatin B, also called stefin B or liver thiol proteinase inhibitor, is a member of family 1 of the cystatin superfamily (1). Like Cystatin A, it is an intracellular inhibitor regulating the activities of cysteine proteases of the papain family such as cathepsins B, H and L (2). Cystatin B-deficient mice have increased expression of proteolysis, apoptosis and glial activation genes, which is consistent with the pathology found in the mouse model of human progressive myoclonus epilepsy (EPM1) (3). The mouse Cystatin B consists of 98 amino acid residues (4).
Abrahamson, M. (1994) Methods Enzymol. 244:685.
Pol, E. and I. Bjork (1999) Biochemistry 38:10519.
Lieuallen, K. et al. (2001) Hum. Mol. Genet. 10:1867.
Pennacchio, L.A. and R.M. Myers (1996) Genome Res. 6:1103.
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