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Antibody News

Wide Ranging Uses for the Autophagy Marker - Beclin-1 Antibody

Thursday, October 10, 2013 - 14:15

Beclin 1 is the first mammalian gene identified as a mediator of autophagy, and plays important roles in development, tumorigenesis, and neurodegeneration. Research with the beclin-1 antibody has revealed that, Beclin 1 is found in complex with the the anti-apoptotic protein Bcl2 under normal conditions, and must disassociate from the complex for macroautophagy to be induced in response to cell starvation (1).

Researchers have correlated beclin 1 expression in gastric cells and tissues (via beclin1 antibody immunoblotting) with both clinicopathology and survival rates, and were able to find promising evidence supporting the promising use of beclin1 as a prognostic marker for lymph node-positive gastric cancer patients (2).  A separate oncology...

Vision Infographic: Do you see how I see?

Wednesday, October 9, 2013 - 12:48

Vision involves several parts of the eye processing light which send signals to the brain via the optic nerve to process information. Learn more about the vision process and related ocular proteins in the infographic below.

 

Novus Biologicals offers research reagents mentioned in this infographic including:

Watch out for upcoming blogs in our series on sensory proteins!

Resources:

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IRE1: Apoptosis, Autophagy and ER Stress Response

Monday, October 7, 2013 - 11:56

IRE1 resides in the endoplasmic reticulum (ER) as a transmembrane protein with both serine-threonine kinase and endoribonuclease activities. It acts as an unfolded protein response (UPR) sensor through XBP1 transcriptional activation and has been found to have many physiological functions due to the fundamental importance of protein folding. Lipson’s group used the IRE1 antibody in pancreatic beta cells to demonstrate that IRE1 phosphorylation in response to high glucose conditions is coupled to insulin biosynthesis (1). In liver cells, IRE1 antibody was used to show demonstrate that cannabidiol (CBD)-induced apoptosis activates the ER stress response including the IRE1 pathway and other pro-apoptotic pathways including c-Jun N-terminal kinase (JNK) (2). This...

LOX propeptide: A novel peptide cancer therapeutic

Friday, October 4, 2013 - 12:04

Lysyl oxidase, also known as LOX, is a copper-dependent enzyme that cross-links collagen and elastin through the oxidative deamination of peptidyl lysine (collagen and elastin) and hydroxylysine (collagen only) residues, thereby playing a critical role in maintaining the structural integrity of the extracellular matrix (1).

There are five proteins in the LOX family, LOX itself and four LOX-like proteins (LOXL1-4). These share a highly conserved C-terminus, which encodes the enzyme domain, and an N-terminal region that shows greater variation between different family members and encodes a propeptide (2). LOX is highly expressed in tissues that contain collagen or elastin fibres, which include skin, lung, cartilage and the cardiovascular system, and is secreted as a 50kDa pro-enzyme that is subsequently cleaved to give rise to the functional 32kDa LOX enzyme, and the 18kDa LOX propeptide.

LOX is considered to be a potential therapeutic...

PINK1: Promoting Organelle Stability and Preventing Parkinson's disease

Thursday, October 3, 2013 - 13:54

PINK1 is a protein serine/threonine kinase (PTK) that protects the organelles from cellular stress and controls selective autophagy to clear damage. Exner, et. al. were among the first to report that PINK1 deficiency in humans was linked to autosomal recessive occurrences of Parkinson's disease (PD) and neurogenerative pathology (1). They employed RNA interference-mediated down regulation of PINK1 and PINK1 antibody to show that their mitochondrial defect knockdown could be rescued by overexpression of parkin, a ubiquitin-ligase complex component that has also been heavily linked to familial PD.

LC3: Roles in Autophagy, Apoptosis, Neurological Diseases and Cancer

Wednesday, October 2, 2013 - 12:14

LC3 is distributed ubiquitously in eukaryotes and is a heavily studied autophagy biomarker that was originally identified as a subunit of MAP1A and MAP1B. Because autophagy is a crucial process for maintaining normal neural networks and function, understanding neuronal autophagy is important. Young's group at Univ. of Wash Medical Center studied LC3 isoform conversions using the LC3 antibody for immunohistochemistry and immunoblotting in cultured primary cortical neurons obtained from transgenic mice expressing tagged-LC3 (1). They found an interesting link between nutrient deprivation and autophagy suggesting the latter is activated by reduced...

SM047: A Marker for Ovarian Adenocarcinoma

Monday, September 30, 2013 - 12:13

Glandular tissues synthesise substances for release, such as hormones and enzymes. The term adenocarcinoma is used to describe a cancer that originates within a glandular tissue, for example the ovary.

The incidence of ovarian cancer is low, yet ovarian cancer is the most lethal gynaecological malignancy and typically has a poor prognosis. There are currently known to be more than 30 different types of ovarian cancer, of which approximately 90% originate from epithelial cells. To date, the most well-established biomarker for the diagnosis of ovarian cancer is MUC16, previously known as CA125. However MUC16 is associated with several other pathological conditions and work is on-going to fully elucidate its role in cancer cell growth and disease progression (1). MUC16 is a tumor-associated antigen that is cleaved from the surface of...

LC3B: From Autophagy to Cancer

Friday, September 27, 2013 - 10:48

LC3B is subunit component of the LC3 autophagy biomarker associated with microtubule-associated proteins MAP1A and MAP1B and one of the best characterized markers to date. In resting state, it is cytosolic, but upon activation, is lapidated and becomes embedded in the autophagosomal membrane. The role of autophagy as an alternative cell energy source under stress (conditions such as GF deprivation, starvation, and hypoxia) is well-documented. LC3B antibody was used in confocal microscopy studies to examine a three-dimensional bovine mammary epithelial cell (MEC) culture system (1). LC3 was part of a panel of autophagic and apoptotic markers followed in the development of acinar structures...

CD34 Serves as an Important Marker in Disease Research

Thursday, September 26, 2013 - 13:11

CD34 is a cell surface glycoprotein that aids cells in cell-cell adhesion. It is expressed on endothelial cells where it is known to bind L-selectin and may aid in migration of T-cells. Moreover, it is expressed on hematopoietic stem cells (HSC), muscle satellite cells, and endothelial cells and may serve as a cell surface marker for characterizing these cell populations.  Although these cells, including HSCs, are rare, CD34 antibodies facilitate their study by allowing researchers to identify, count, and purify these cells using flow cytometry or FACS.

HSCs that express CD34 are commonly isolated from the bone marrow and blood of adult donors.  Recent studies have examined more efficient means of extracting cells expressing CD34.  In these studies, researchers demonstrated that umbilical cord...

VEGF Receptor 1 Infographic

Wednesday, September 25, 2013 - 13:06

VEGF Receptor 1 plays a critical role in vasculogenesis, angiogenesis, cell migration, cell survival, chemotaxis and cancer cell invasion. Learn more about VEGF Receptor 1 in the infographic below.

Novus Biologicals offers various VEGF Receptor 1 reagents for your research needs including:

53BP1, DNA Damage Response and Tumor Suppression

Monday, September 23, 2013 - 10:46

53BP1 (p53 binding protein 1) was originally thought to be a p53 transcriptional enhancing partner, but now has been shown to be an ataxia telangiectasia mutated (ATM) substrate. It is a late DNA damage response (DDR) marker, appearing in the telophase/cytokinesis phase in mitotic mammalian cells (1). 53BP1 antibody was employed to show the absence of a full DDR response in mitotic cells – this response is also suppressed by high levels of cyclin-dependent kinase1 (CDK1) activation. Another cell cycle study involving 53BP1 antibody focused on characterizing those genomic loci within metaphase chromosomes that are prone to gaps and breaks, also known as common fragile sites (2).  Their findings suggest a model of DNA damage where the formation of large nuclear bodies containing 53BP1, MCD1, and OPT domains is triggered in G1 cells in response to replication inhibitors...

Hsp70

Friday, September 20, 2013 - 12:34

70-kDa Heat Shock Protein (Hsp70) is an abundant protein cofactor commonly known as a molecular chaperone. Found in most eukaryotes, Hsp genes are members of a heat-inducible multigene family. These proteins are found in most cellular compartments of eukaryotes - everything from nuclei, mitochondria, chloroplasts, to endoplasmic reticulum and cytosol. A review on chaperone-mediated protein folding and the distinction between the different chaperone families highlights the abundant use of Hsp70 antibody (1). Bork’s group employed the Hsp70 antibody to demonstrate that not only does Hsp70 bind to ATP with high affinity, but interestingly, it also possesses a weak ATPase activity that can be stimulated through binding to unfolded proteins and synthetic peptides, suggesting a...

PIEZO1: A Mechanosensitive Ion Channel Protein

Thursday, September 19, 2013 - 16:10

PIEZO1, and its close homologue PIEZO2, are mechanosensitive ion channel proteins. Mechanosensitive ion channels couple protein conformation to the mechanics of the surrounding membrane, and switch between a closed state and an open state in response to changes in membrane tension, thickness, or curvature. Cells use this information to ensure viability under conditions of osmotic stress or membrane deformation (1).

PIEZO1, also known as FAM38A, is a large (2521 amino acid, 287kDa) protein with multiple transmembrane domains, and bears little resemblance to other ion channel proteins. Using GFP fusion constructs of ion channels with known stoichiometry, Coste et al have shown that PIEZO1 assembles as a homo-tetramer in living cells. This same group used PIEZO1 antibodies to generate Western blot data to support this observation and, additionally, demonstrated that PIEZO1 is...

Survivin: As long as I know how to live I know I will

Wednesday, September 18, 2013 - 07:54

Survivin is an anti-apoptotic protein from a large family with related members such as X-linked IAP, cIAP1 and cIAP2, IAP-like protein-2, melanoma IAP, Livin, and NAIP. Survivin regulates fundamental physiological events including the cell cycle, fetal development, and cell migration. To further understand apoptotic pathway mechanisms, Xu’s group at MD Anderson used the survivin antibody in their DNA microarray screen of promyelocytic leukemia protein (PML) target genes (1). There, they were able to identify a novel PML4-dependent pathway with survivin as a main downstream target.

HIF Prolyl Hydroxylase 1: A Key Regulator of HIF1A Levels

Tuesday, September 17, 2013 - 08:06

Hypoxia inducible factors (HIFs) are transcription factors that regulate the cellular response to decreases in oxygen levels. Under conditions of hypoxia HIFs activate the transcription of a diverse range of genes, resulting in increased oxygen delivery to the cell or metabolic adaptation.

Like all transcription factors, HIFs require careful regulation. This is mediated by post-translational modifications including phosphorylation, acetylation and hydroxylation. Prolyl hydroxylation is one of the most well studied regulators of HIF levels; this is catalysed by a family of proteins known as the HIF prolyl hydroxylases.

Three mammalian HIF prolyl hydroxylases have been identified (1).  HIF prolyl hydroxylase 1 (also known as PHD1, EGL nine homolog 2, HPH-1) is constitutively expressed, and is pre-dominantly localised to the nucleus where it plays a pivotal role in targeting...

GPR49/LGR5: Stem Cells and the WNT Signaling Pathway

Friday, September 13, 2013 - 13:49

GPR49/LGR5 (G protein-coupled receptor 49/leucine-rich repeat-containing G protein-coupled receptor 5) is also known by the names FEX, GPR67, GRP49, HG38, and MGC117008). It is an orphan receptor and structurally related to members of the mammalian large transmembrane glycoprotein hormone receptor family (FSH-R, TSH-R, and LH-R). Within the LGR family here are three major subgroups: glycoprotein hormone receptors, a subgroup of GPR48, GPR49, and LGR6, and the receptors of relaxin family ligands (LGR7 and LGR8). LGR5 and GPR48/LGR4 were first identified and characterized in Hsu’s lab (1). Within its subgroup family, GPR49 is emerging as a significant player in stem cell biology as it is highly expressed on stem cells found in the small intestine, colon, and hair follicle.

TRF2: Telomere Maintenance and Protection

Thursday, September 12, 2013 - 12:09

TRF2 (telomeric repeat-binding factor 2) is a homodimeric protein that binds the double-stranded 5'-TTAGGG-3' repeat in telomeres. It plays a critical role in the maintenance of telomeres, protecting telomeres against end-to-end chromosomal fusion, and recruiting a number of factors/enzymes required for telomere protection such as the shelterin complex/telosome (TRF1, TRF2, TIN2, RAP1, ACD and POT1), RAP1 and DCLRE1B. Together with DCLRE1B/Apollo, TRF2 plays a key role in T-loop formation and preventing aberrant telomere topology.

Caveolin 1: Roles in Signaling and Cancer

Wednesday, September 11, 2013 - 12:53

Caveolin-1 (CAV1) belongs to the caveolin family of integral membrane proteins 21-24 kD in size. This family of proteins forms the structural component of the caveolar membrane in caveolae, which are the specialized domains in plasma membrane that sequester lipids and proteins. Both Caveolin 1 and Caveolin 2 are abundantly expressed in fibroblasts, differentiated adipocytes, smooth and skeletal muscle and, endothelial cells, whereas the related Caveolin 3 protein is limited to muscular tissue expression. Caveolin 1 interacts with a broad range of proteins including GLIPR2, NOSTRIN, SNAP25, syntaxin, rotavirus A NSP4, CD26, beta Catenin, CDH1, gamma Catenin, BMX, and BTK. It interacts directly with G-protein alpha subunits to regulate their activity. It appears to also be a co-stimulatory signal essential for T-cell...

NBS1: DNA Repair Trigger

Monday, September 9, 2013 - 11:59

NBS1 (Nijmegen breakage syndrome protein 1) is a component of the MRN complex (Mre11-Rad50-Nbs1) that plays important role in detecting DNA double strand breaks (DSBs) and triggering the downstream cascade. DSBs can be caused by ionizing radiation, chemotherapy drugs, metabolic ROS, replication errors, programmed enzymatic activities during meiosis/V(D)J recombination, etc. NBS1 acts as a DSB sensor, co-activator of DSB-induced cell cycle checkpoint signaling, and also the repair-effector via two competing DSB repair pathways - homologous recombination (HR) and non-homologous end-joining (NHEJ). The MRN complex also associates with telomeres at the terminal ends of linear chromosomes and contributes to their maintenance.

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xCT: Amino Acid Transport and Disorders of the Central Nervous System

Friday, September 6, 2013 - 13:53

xCT, encoded by the gene SLC7A11, is a member of the heterodimeric amino acid transporter family. Proteins within this family are linked to one another via a disulphide bond to form heterodimers consisting of one light subunit and one heavy subunit (1). These heterodimers facilitate the transport of amino acids across cell membranes. The light subunit xCT dimerises with the heavy subunit 4F2hc and the role of the xCT-4F2hc heterodimer, also known as system Xc-, is to couple the release of one molecule of intracellular glutamate to the uptake of one molecule of extracellular cystine (2).

Immunohistochemistry: xCT Antibody Immunohistochemistry: xCT Antibody

Glutamate is the primary excitatory...

Hoist the DYKDDDDK Epitope Tag

Thursday, September 5, 2013 - 14:50

The DYKDDDDK Epitope Tag antibody was raised against a short, artificial sequence that is widely and commonly used as a protein fusion tag. It is pervasively present in a vast amount of scientific studies, and is a very powerful investigative research tool for applications such as immunofluorescence, immunoprecipitation, Western blot, and immunohistochemistry. The DYKDDDDK Epitope Tag antibody was engineered by Park's group at the Rockefeller University as a more superior antibody for improved detection and sensitivity in a wide variety of methods and investigative analyses (1). This antibody was assessed and validated for efficacy in various immunodetection methods, especially immunofluoresence immmunohistochemistry and flow cytometry.

Survivin: Infographic

Wednesday, September 4, 2013 - 13:31

Survivin is involved in promoting cell proliferation and is an inhibitor of apoptosis. Survivin has a critical role in cancer proliferation and neural development. It may have an impact on neural cell proliferative responses following brain injury.

Learn more about Survivin in our infographic below.

Novus Biologicals offers various Survivin reagents for your research needs including:

Alpha Tubulin: A Fundamental Cytoskeleton Protein with Many Roles

Tuesday, September 3, 2013 - 13:07

The cytoskeleton consists of three major types of cytosolic fibers: microtubules, microfilaments (actin filaments), and intermediate filaments. Tubulins are the microtubule building block and exist as globular dimeric proteins of alpha/beta chains. There are five distinct forms: alpha, beta, gamma, delta, and epsilon tubulin. Alpha and beta tubulins assemble into heterodimers which then multimerize to form the long microtubule filaments. Several fundamental cellular movements require microtubules – the beating of cilia and flagella, cytoplasmic transport of membrane vesicles, chromosome alignment during meiosis/mitosis, nerve-cell axon migration, etc. These movements all result from a balance and dynamic competition between both the...

ATG5: From Autophagy to Alzheimer's Disease

Friday, August 30, 2013 - 08:42

Autophagy is a conserved mechanism whereby cells form double membrane autophagosomes to sequester cytoplasmic components for subsequent destruction by fusion with lysosomes (eukaryotes) or vacuoles (yeast). Targets of autophagy include aging proteins, damaged organelles and invasive pathogens, and the resulting breakdown products can be recycled back to the cytoplasm for re-use under conditions of starvation (1). Autophagy is critical for cell survival and homeostasis, and is up-regulated in response to cellular stresses such as growth factor deprivation or pathogen infection. However, a number of pathological conditions are associated with defective autophagy including cancer, neurodegeneration and cardiovascular...

ZEB1: Regulating Organ Development and Metastasis

Thursday, August 29, 2013 - 12:05

ZEB1 (Zinc finger E-box-binding homeobox 1) encodes a zinc finger transcription factor that represses T-lymphocyte-specific IL2-gene expression through binding to a small negative regulatory domain within the IL2 transcriptional start site (1). Along with its closely related family member ZEB2, ZEB1 regulates adhesion/migration genes such as E-cadherin and microRNA 200b (miR-200b) in complex developmental processes of organogenesis such as palate formation as shown by use of the ZEB1 antibody in localization profiles (2).

Western Blot: ZEB1 Antibody Western Blot: ZEB1 Antibody

Kizuka, et. al. used...

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