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Antibody News

Essential to Death: ATG5 (autophagy protein 5, apoptosis-specific protein ASP)

Tuesday, July 22, 2014 - 14:53

The ATG5 protein belongs to the ATG autophagy regulator family. This family controls the highly conserved cell's homeostatic response to a wide variety of both self- and foreign-originating cellular stimuli. ATG5 itself is ubiquitously expressed in most cells and most often found co-localized with the cytoplasmic non-muscle actin protein under normal resting conditions. Upon activation of apoptosis, ATG5 expression is then dramatically intensified, with ATG5 directly complexing with its ATG family members to produce autophagosomes. An intriguing application of the ATG5 antibody was done by Herd’s group where they used it to characterize the effect of silica nanomaterials on both cell uptake and toxicity in epithelial phagocytic cells1. The antibody allowed this group to monitor the effect of physicochemical manipulation of these silica-based nanoparticles on lysosomal formation and function, autophagic like activity, and...

BRCA1 - A Critical Tumor Suppressor Gene in Women

Monday, July 21, 2014 - 14:04

Breast cancer 1, early onset (BRCA1) is a well-known tumor suppressor gene that was originally discovered due to its link with early-onset breast and ovarian cancer in women. The BRCA1 protein contains the following domains: RING finger, RAD51-interaction, and BRCT (BRCA1 C-terminus). The N-terminus RING domain enables binding to several proteins - including BARD1 (BRCA1-associated RING domain protein) - allowing the formation of heterodimers. The RING finger is important for tumor suppressor activity. The RAD51-interaction domain is involved in DNA double-stranded break (DSB) repair. The loss of RAD51 binding increases cancer risk due to increased increments of damaged DNA. The BRCT functions as a transcriptional activation domain and is involved in cell-cycle control and DNA repair. BRCA1 has been implicated in a wide range of cancer-related activities, such as cell cycle progression, DNA repair, DNA damage-responsive cell cycle checkpoints, transcription regulation,...

CD4 - An Important Co-receptor Assisting TCRs

Thursday, July 17, 2014 - 14:42

The cluster of differentiation 4 (CD4) protein is a surface, type I membrane-embedded glycoprotein that is found on a wide range of cells: T-lymphocytes, B-cells, macrophages, granulocytes, and developmentally-dependent regions specific to the brain. It interacts with major histocompatibility complex (MHC) class II anti-genes, serves as the human immunodeficiency virus (HIV) receptor, and can initiate/augment early phase T-cell activation.  In immune-mediated and central nervous system (CNS) infectious diseases, CD4 indirectly mediates neuronal damage. There exists three identified CD4 splice variants, each encoding a different CD4 isoform: one with a predicted transmembrane (TM) region and two with predicted signal peptides.

Cyclooxygenase 2 (COX2, PGHS2) - I stay with Inflammation!

Monday, July 14, 2014 - 16:08

COX2 is an inducible dimeric enzyme belonging to the prostaglandin G/H synthase family that enables cells to respond to growth factors, tumor promoters, and cytokines. Prostaglandins are synthesized through the creation of cyclic endoperoxides from arachidonic acid and COX2 catalyzes the committed step in the biosynthetic pathway.  Initially identified as an immediate early growth response gene, COX2 is induced by a wide variety of stimuli such as lipopolysaccharide (LPS) and peptoglycan (PGN). COX2 is highly expressed in activated macrophages and plays a role in immune response regulation. It has been implicated as a mediator of inflammation as well as a modulator of prostanoid signaling in activity-dependent plasticity. It holds promise as both a marker in immune response regulation studies and an inflammatory disease therapeutic target....

C9RANT - A Potential Target in Neurodegenerative Diseases

Friday, July 11, 2014 - 13:41

C9RANT is a newly discovered protein-like chain that holds great potential promise as a benchmark for measuring disease activity and therapeutic response for patients with the devastating conditions of amyotrophic lateral sclerosis (ALS) and dementia. Mutations within a non-coding region of the C9ORF72 gene are responsible for 20-40% of cases of familial ALS1. This class of mutations generates repetitive, high molecular weight RNA chains which are insoluble and aggregate within the brain as C9RANT accumulations. As with the tau protein in Alzheimer's disease, C9RANT is not found in either healthy people or those with other neurologic diseases.

Your Expectations, Experience, and Evaluations of Antibody Customer Service Programs

Thursday, July 10, 2014 - 12:50

What do scientists think about customer service at places like Novus, companies that sell the antibodies that are often critical components of a wide variety of experiments? Novus ran a survey to find out, and here's what we uncovered.

There is a clear disconnect between expectations of antibodies, and how they perform in real world experiments. Seventy percent of respondents said that they expected their antibodies to work every time, but only 35% reported that this is what actually happens.

When an antibody fails, 69% of respondents expected a full refund of the cost of the antibody. But less than half felt that they had been offered a refund or a replacement product that was warranted given experimental circumstances. This finding really surprised us because Novus offers a 100% guarantee on every product—so to the majority who felt that they didn't get a refund or replacement, talk to us. We stand behind our products and want them to work...

Aromatase - A Key Enzyme in the Biosynthesis of Estrogens

Wednesday, July 9, 2014 - 14:59

The enzyme, aromatase, belongs to cytochrome P450 family of monooxygenases known for their key role in drug catabolism and cholesterol/steroid synthesis. Aromatase uses a heme-group as a co-factor to catalyze the formation of aromatic C18 estrogens from C19 androgens. This conversion includes that of testosterone into estradiol as well as androstenedione to estrone. Aromatase is a peripheral membrane protein. In addition to being found in the female reproductive tract and adipose tissue, it can also be found in testis, liver, and brain - as well as certain tumors including breast cancer. During ontogenesis, it plays an important role in CNS and gonad development, as well as sex differentiation. Defective aromatase leads to the aromatase excess syndrome (AEXS) and aromatase deficiency (AROD). Additionally, obesity has been linked to abnormally high aromatase expression in...

Blue Marker Antibody: An easy solution for BLUE-pre-stained markers

Monday, July 7, 2014 - 13:11

Western blotting is a widely used technique for the detection and analysis of proteins based on their ability to bind to specific antibodies. It was first described by Towbin, et.al in 1979 and has since become one of the most commonly used methods in life science research. In Western blotting, a mixture of proteins is separated based on molecular weight, and thus by type, through gel electrophoresis. The proteins are visualized with antibodies specific to the target under investigation. Typically pre-stained molecular weight markers are transferred alongside the target proteins enabling on-blot molecular weight sizing of the protein. However pre-stained markers are not visualized by the antibody detection methods making sizing more difficult and impractical. Novus Anti-Blue Antibody (NBP2-33376) detects BLUE-pre-stained molecular weight markers, does...

A Key to Fight Stress: ATF6

Thursday, July 3, 2014 - 13:43

The protein ATF6 is a constitutively expressed transcription factor that is a key mediator of the unfolded protein response (UPR) that allows mammalian cells to maintain cellular homeostasis under conditions of environmental and physiological stress. ATF6 is endoplasmic reticulum (ER) membrane-anchored in its inactive form, and under certain stress conditions, translocates to the Golgi where it is processed into its active form through action of the S1P and S2P proteases. This regulated intramembrane proteolysis allows the activated, N-terminal ATF6 component to then translocate to the nucleus, where it binds to ER stress-response elements in ER stress-response genes (ERSRGs). Detailed experimental methods for understanding UPR and its relationship to stress-related conditions like diabetes and neurodegeneration have been worked out and are dependent on the ATF6 antibody1.

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ABCG8: Cholesterol's Fate

Wednesday, July 2, 2014 - 16:14

The ATP-binding cassette (ABC) transporter genes are key gatekeeper molecules that regulate the amount of dietary cholesterol retained by the body. They are a multifamily comprised of cAMP-dependent anion transporter cell membrane proteins that monitor reverse cholesterol efflux from cells into the peripheral tissues via apolipoprotein A-I (Apo). ABCG8 is expressed at high levels in the liver and intestine. Normal digestion is partially facilitated by ABCG8 and its counterpart ABCG5, which together complex into a heterodimer that transports cholesterol out of the liver and into bile. Unsurprisingly, ABCG8 mutations lead to sterol accumulation, gallstone disease, biliary cancer, hypercholesterolemia, and atherosclerosis. Studies related to diabetes, heart disease, and digestive cancer will often assess the expression, function, and ABCG5-dependent interaction of ABCG8. Kobayashi’s group performed a western blot against...

CIP2A - A lean, mean, oncoprotein machine

Monday, June 30, 2014 - 15:33

The CIP2A protein was originally identified as p90, a cytoplasmic auto-antigen from the serum of a cancer patient. It was later found to inhibit protein phosphatase 2A (PP2A) activity as well as interact with c-myc. CIP2A's inhibitory activity blocks c-myc phosphorylation and its subsequent proteolytic degradation, producing a stable c-myc that promotes aberrant cell growth and transformation. In addition to its role in c-Myc stabilization, CIP2A promotes anchorage-independent cell growth and in vivo tumor formation. Not surprisingly, CIP2A is overexpressed in certain human malignancies and is classified as a proto-oncogene. Pallai et al used the CIP2A antibody to follow-up some of their earlier studies on cell-type specific CIP2A expression in various cancer cell lines1. In these later studies, they found that the transcription factors Ets1 and Elk1 modulate expression in cervical...

MAT2A - A Protien Coding Gene

Friday, June 27, 2014 - 10:39

The enzyme S-adenosylmethionine synthetase, or MAT, catalyzes the formation of S- adenosylmethionine (AdoMet or SAMe) from methionine and ATP. AdoMet is the principal biological source of synthesized methyl, and is found in all cells but most prominently in the liver. In mammalian tissues, there are three distinct AdoMet synthases - the alpha, beta, and gamma isoforms. While the alpha and beta variants are uniquely expressed solely in the adult liver, gamma is more widely distributed in the extrahepatic tissues. Alpha and beta appear to be induced in human hepatocellular carcinoma (HCC), while patients with chronic liver disease and liver cirrhosis due to various triggers (including alcohol) have lowered levels of MAT activity as well as SAMe biosynthesis.

CAIX - One of the Best Cellular Markers of Hypoxia

Thursday, June 26, 2014 - 16:00

The protein, carbonic anhydrase IX, belongs to the carbonic anhydrase family which consists of enzymes that rapidly convert carbon dioxide and water into the end products of carbonic acid, protons, and bicarbonate ions. These enzymes play a widespread role in cells by regulating the pH of normal tissues, and are abundantly expressed in all mammalian tissues. Due to its stability and membrane location, CAIX is one of the most hypoxically-inducible genes, and has become a reliable hypoxia histochemical marker. CAIX also plays a role as an important diagnostic marker for various cancers, notably renal cell carcinoma (RCC).  A detailed multivariate analysis of prognostic factors in advanced RCC patients depended upon an antibody panel that included the CAIX antibody – this study established the utility of markers such as HIF-...

Essential for Bones: Osteoprotegerin (OPG, TNFRSF11B)

Monday, June 23, 2014 - 14:28

Also known as OPG, TR1 and OCIF, this gene encodes Osteoprotegerin, a heparin-binding secretory glycoprotein that belongs to the TNF-receptor superfamily. The TNFR superfamily consists primarily of transmembrane proteins that elicit signal transduction in a variety of cells and are known to mediate diverse biological responses, including cytotoxicity and apoptosis, Osteoprotegerin (OPG) was isolated independently by two laboratories in 1997 [1,2]. OPG comprises 401 amino acids of which 21 are a signal peptide which is cleaved and generates the mature form of the protein with 380 amino acids.  OPG is produced as a monomer (55-62 kDa), but undergoes homodimerization and is secreted as a disulphide-linked homodimeric glycoprotein with four or five potential glycosylation sites, generating a mature form of OPG of 110-120 kDa. OPG consists of 7...

Scavenger's Helper - SR-BI (scavenger receptor class B member 1, SCARB1)

Friday, June 20, 2014 - 13:00

SR-B1 belongs to the CD36 scavenger receptor family and serves as a receptor for several ligands including phospholipids, cholesterol ester, lipoproteins, phosphatidylserine, and caveolae localized HDL. It is expressed in endothelial cells, macrophages, and dendritic cells. It facilitates the flux of both free and esterified cholesterol between the cell surface and extracellular donors and acceptors (HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins). Thus SR-B1 plays an important role in meditating the uptake of HDL-derived cholesterol and cholesterol ester in both liver and steroidogenic tissues. It also appears to be involved in the phagocytosis of apoptotic cells, uptake of lipid soluble vitamins (vitamin E and carotenoids), as well as pathogen recognition, and the anti-inflammatory response. SR-BI has also been involved in the capture and cross-presentation of antigens from viruses, bacteria and...

IRAK4: The "master IRAK" critical for initiating immune responses

Thursday, June 19, 2014 - 13:30

IRAK4, also known as Interleukin-1 receptor-associated kinase 4, is a serine/threonine-protein kinase that plays a critical role in initiating innate and adaptive immune responses against foreign pathogens. It activates NF-kappaB in both Toll-like receptor (TLR) and T-cell receptor (TCR) signaling pathways.

IRAK-4 belongs to a family of mammalian IRAKs that include IRAK-1 [11], IRAK-2 [12], and IRAK-M, also known as IRAK-3 [13]. Out of the four members in the mammalian IRAK family, IRAK-4 is considered to be the “master IRAK”, the only family member indispensable for IL-1R/TLR signaling. In humans, mutations resulting in IRAK-4 deficiency have been linked to susceptibility to bacterial infections, especially recurrent pyogenic bacterial infections. Though characterized functionally as a serine/threonine kinase, the crystal structures revealed that...

ASC-2: An important co-activator of different nuclear receptors

Wednesday, June 18, 2014 - 14:58

ASC-2, also known as Nuclear Receptor Co-Activator 6, directly binds nuclear receptors and stimulates the transcriptional activities in a hormone-dependent fashion. It is involved in the co-activation of different nuclear receptors, such as for steroids (GR and ERs), retinoids (RARs and RXRs), thyroid hormone (TRs), vitamin D3 (VDR) and prostanoids (PPARs). It is believed to function as a general co-activator, rather than just a nuclear receptor co-activator. It may also be involved in the co-activation of the NF-kappa-B pathway and co-activate expression via remodeling of chromatin and its interaction with histone acetyltransferase proteins. Diseases associated with ASC-2 include thyroiditis and AIDS dementia complex.  Among its related super-pathways are Regulation of Lipid Metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha) and Metabolic pathways.

Using Novus NB200-336 ASC-2...

LYVE1 - It's Alive! It's a LYVE

Monday, June 16, 2014 - 10:50

LYVE1 (lymphatic vessel endothelial hyaluronan receptor-1) is one of the most specific and widely used mammalian lymphatic endothelial markers.It is found in lymph nodes and at the luminal/abluminal surfaces of lymphatic vessels. It is a single-pass type I membrane protein that exists in a disulfide-linked homodimer form. LYVE1 undergoes ligand-dependent internalization and recycling at the cell surface, and exhibits ligand-specific transporter trafficking between intracellular organelles and the plasma membrane. It plays a key role in the autocrine regulation of cell growth mediated by growth. LYVE1 also behaves as hyaluronan transporter, either mediating its uptake for catabolism within lymphatic endothelial cells themselves, or its transport into the lumen of afferent lymphatic vessels for subsequent re-uptake and degradation in lymph nodes. A group at ImClone employed the LYVE1 antibody in their...

CD81/TAPA1: I'm on Tapa the Cell

Friday, June 13, 2014 - 10:07

Target of the antiproliferative 1 (TAPA1), also known as CD81, is found in the plasma membrane in lymphocytes and plays an important role in the regulation of lymphoma cell growth. This transmembrane 4 superfamily (TM4SF) protein is primarily found on CD4+CD8+ thymocytes as well as broadly in the periphery, with high-level expressed in cell cohorts such as B-cells, NK cells, macrophages, and dendritic cells. CD81 appears to be involved in a variety of cellular immune processes such as activation, proliferation, and differentiation. It is believed to act as a viral receptor for HCV. Mutations affecting CD81 cause immunodeficiency - characterized by antibody deficiency, recurrent bacterial infections, and hypogammaglobulinemia. The activation of T-cells induces CD81 upregulation. Yoshie’s group at the Shionogi Medical Institute developed the M38 clone of the CD81 antibody in...

IRE1 alpha - stress no more!

Thursday, June 12, 2014 - 16:37

The unfolded protein response (UPR) is a eukaryotic cell mechanism that copes with ER stress and is initiated by three ER-localized sensors: PKR-like ER kinase (PERK), activating transcription factor 6 (ATF6), and inositol-requiring enzyme 1 alpha (IRE1 alpha). The UPR-responsive downstream signaling is regulated through the ATF6 and IRE1-XBP1 pathways. UPR serves three important mechanisms: inhibiting protein translation to restore normal cell function; increasing production of protein folding-involved chaperones; and activating misfolded protein ubiquitination for targeting and degradation. When the ER-stress is not appropriately relieved, UPR leads to the fail-safe of apoptosis. IRE1 alpha is a single-pass type I membrane protein within the ER membrane, and is ubiquitously expressed, with high levels particularly in the pancreas. It exhibits autophosphorylation and under ER stress conditions, is ADP-ribosylated by...

CD206 - a potential candidate for targeted delivery of therapeutics

Wednesday, June 11, 2014 - 16:18

Macrophage mannose receptor 1 (MRC1), also known as CD206, is a Pattern Recognition Receptor (PRR). PRRs are expressed by antigen processing and presentation cells, and are activated upon detection of Pathogen-Associated Molecular Patterns (PAMPs). PAMPs are molecular sequences shared by large groups of pathogens, which are essential for microbial survival and/or pathogenicity and include cell wall components such as glycoproteins. Many glycoproteins derived from bacteria and fungi are mannosylated, and CD206 is specifically involved in the recognition of these molecules, resulting in endocytosis of the micro-organisms which express them.

CD206 is a type I transmembrane protein that belongs to the C-type lectin family, and is expressed by macrophages and dendritic cells (1). Macrophages can be...

LOX: A prime enzyme

Tuesday, June 10, 2014 - 08:46

LOX is a copper-dependent amine oxidase enzyme that executes post-translational oxidative deamination on peptidyl lysine residues in precursors of fibrous collagen and elastin. LOX is secreted into the extracellular environment in an inactive form, where it is processed into an active form. Its activity is crucial for maintaining both the tensile and elastic properties of connective tissue residing within skeletal, pulmonary, and cardiovascular systems. Furthermore, its expression is highly regulated during normal development and uncontrolled expression or activity has been documented in a wide range of predominantly ECM diseases.  These diseases include, but are not limited to, myocardial ischemia/heart failure, atherosclerosis, scleroderma, liver cirrhosis, glaucoma, Alzheimer's/non-Alzheimer's dementia, and Wilson's disease. In addition to its matrix modifying functions, LOX is also heavily implicated as a tumor suppressor.

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IKK alpha says "no" to NFk beta

Thursday, June 5, 2014 - 16:19

The nuclear factor kappa B (NFkB) is a ubiquitous transcription factor essential for the activation of immune and inflammatory responses. NFkB activity is inhibited when it is associated with IkB proteins in the cell cytoplasm. IkB proteins are phosphorylated by the IkB kinase complex. The IKK serine protein kinase consists of alpha and beta subunits (IKK alpha and IKK beta). These subunits interact with each other and together, are essential for NFkB activation. IKK alpha is expressed in variety of human tissues. The targeted disruption of the IKK alpha gene in mice results in severe skin and limb abnormalities and newborn death. USCD researchers used an IKK alpha antibody to identify specific protein functions dependent on catalytic activity1. They determined that during mammary gland development, IKK alpha is an essential link connecting RANK and cyclin D1 expression....

A Big Guy for the Catecholamine Synthesis - Tyrosine hydroxylase (TH)

Wednesday, June 4, 2014 - 16:23

In the synthesis pathway for the catecholamines - dopamine, epinephrine, and norepinephrine, tyrosine hydroxylase is the rate-limiting enzyme. Through alternative mRNA splicing, a wide molecular diversity of TH isoforms are generated that are tissue-specific and carry varied enzymatic activities, allowing for differential neurotransmitter availability at various synapses. The devastating condition of Parkinson's disease (PD) is due to a TH deficiency, where dopaminergic neuron degeneration and low dopamine levels consistently are present, along with gross neurochemical abnormalities when monitored by tyrosine hydroxylase antibody staining1. Tyrosine hydroxylase antibody staining patterns in postmortem PD brain samples indicate that phosphorylation at the N-terminus of...

LAMP2: Protector of the lysosome

Monday, June 2, 2014 - 13:25

LAMP2 belongs to the family of membrane glycoproteins who confer selectins with carbohydrate ligands. LAMP2 has been implicated in tumor cell metastasis, as well as overall protection, maintenance, and adhesion of the lysosome. It appears that LAMP2 may protect the lysosomal membrane from autophagy, as well as maintain the required acidic environment necessary for proper function.  LAMP2 is a single-pass type I membrane protein that shuttles between endosomes, lysosomes, and the plasma membrane. Bhandari’s group performed immunofluorescence using a LAMP2 antibody to characterize the E3 ubiquitin atrophin-interacting protein 4 (AIP)-arrestin-2 complex and its regulation of chemokine receptor CXCR4 sorting in endsomes1. LAMP2 mutations result in the lysosomal glycogen storage disease "Danon Disease", which is characterized by the accumulation of autophagic material in striated myocytes. This breakthrough...

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