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Antibody News

Integrin Expression and FACS

Wednesday, June 5, 2013 - 11:34

Integrins are a group of trans-membrane receptors which encompass alpha and beta subunits acting as adhesion particles in addition to various other important cellular functions. Integrins are recognized to enable cell-cell, cell-ECM, cell-pathogen interface along with signaling through the plasma membrane comprising of critical cellular functions such as differentiation, migration in addition to survival. Several investigators have documented variations in integrin expression and function in several cancers. Numerous integrins such as αVβ3, αVβ5 and α5β1 are attributed to angiogenesis, a critical factor in tumor metastasis and tumor growth. In a recent study (1) it has been demonstrated that the integrins are capable of regulating the expression and activity of several proteases through various pathways there by contributing to the invasive potential of several tumors. FACS has also...

Exploring HIV Effects on T-cells using Flow Cytometry

Monday, June 3, 2013 - 12:22

Florescence activated cell sorting or Flow cytometry is responsible for many of the current innovations made against HIV. Newer-generation FACS machines, proficient of using multi-color panels, are allowing researchers to measure lymphocyte subsets more precisely and cost-effectively. In the case of HIV, flow cytometry can identify which cell subsets are affected by the infection among individual patients. Initial studies using flow cytometry outlined the alterations to major cell pedigrees that occur after HIV infection resulting in a decrease in CD4 positive T-cells and a shared surge in CD8 positive T-cells (1). Consequently, investigators documented the elevated degree at which T-cells were absent in HIV positive human subjects by executing kinetic analyses of T-cell turnover (...

The Space Between: ECM and Collagen I

Friday, May 31, 2013 - 09:44

The extracellular matrix ECM) is the material found in the extracellular environment of all tissues and organs. The composition of the extracellular framework of all vertebrates is dominated by a class of molecules known as collagens, each with unique features suited for a particular function and location.

Immunohistochemistry-Paraffin: Collagen I Antibody

Collagen proteins are composed of three subunit polypeptides that vary in length and interact to form a triple helix due to a unique repeated (Gly-x-y) sequence. Collagen I is one of the most common forms and is...

PINK1: A Critical Player in Mitophagy

Monday, May 20, 2013 - 15:43

PINK1 (PTEN-induced putative kinase 1) is a mitochondrial directed serine-threonine kinase, that regulates normal mitochondrial function and transport vital to normal performance of neurons and neuronal survival. PINK1 has been shown to be localized to the cytosol, endoplasmic reticulum and the mitochondria. Some investigators have associated PINK1 localization to the intermembrane space, outer membrane insertion with a kinase domain facing towards the cytosol. Loss of PINK1 has been demonstrated to be accompanied with amplified oxidative stress and diminished membrane potential along with low levels of ATP.

GFP (Green Fluorescent Protein) Bringing Light to Life

Friday, May 17, 2013 - 10:40

GFP (green florescent protein), originally discovered in the jellyfish Aequorea victoria, (1) is one of the most extensively investigated and exploited proteins in the area of life sciences. GFP is well known for its proficiency emit fluorescence and has proven itself as an indicating marker of gene expression and protein target in intact cells and organisms. To date GFP variants can be chiefly distributed into seven classes based on their elements of their chromophores.  One of the first proposed applications of GFP was to detect the gene expression in vivo as a marker protein, thereby allowing the gene product to be detected in subcellular localization studies.

 

LC3B Empowers Protein Quality Control by Autophagy

Wednesday, May 15, 2013 - 10:44

LC3B, also known as microtubule-associated protein 1 light chain 3 beta (MAP1LC3B), is an autophagy gene that contributes appreciably to protein degradation. Autophagy is a highly synchronized and dynamic catabolic degradation activity that plays an essential role in cellular maintenance, development, antigen presentation and cell death. Aberrations in autophagy have been the underlying mechanisms for neurodegenerative, muscular diseases and are also prominent in hepatic inflammation and cancer. Increased LC3B levels have been reported in mitochondria of human umbilical vein endothelial cells (HUVEC) after oxidative damage as detected by anti-LC3B antibodies in...

Cell Sorting an Odyssey of FACS

Tuesday, May 14, 2013 - 11:22

Florescence activated cell sorting or Flow cytometry permits concurrent measurements of numerous florescence and light scattered events by illuming single cells or molecules in suspension as they flow through a sensing area. Distinct cells or particles could be tangibly separated corresponding to their biochemical properties and biological parameters, while the light is scattered on the molecules either in the form of forward or side scatter. The forward scatter is resourceful in distinguishing between the live and dead cells while the side scatter provides evidence for the granulated content within the particle of interest. A consolidation of both the scattered configurations is helpful in delineating multiple cell types in a given cell population. The flow cytometry is a useful resource and relevant in the separation of the cells based on their subtype or epitope manifestation and the process is popularly known as cell sorting or FACS analysis....

CD11b: Marker for a New Type of B Cell that Participates in Cell-Mediated Immunity

Thursday, May 9, 2013 - 11:45

Think B lymphocytes just produce antibodies? Think again! Although, of course, B cells are vital for the humoral immune response, many studies in recent years have begun to uncover antibody-independent actions of B cells: regulating T cells and thus also playing a part in cellular immunity. For example, B cell depletion therapy, a new treatment for autoimmune disorders, has been found to influence T cells in addition to antibody titers. B cells can affect T cells in opposing ways – both enhancing and suppressing T cell immune responses – and accomplish this via costimulation, production of cytokines, and antigen presentation.  In two recent publications, Griffin and Rothstein describe their discovery that CD11b (cluster of differentiation 11b) distinguishes ‘orchestrator B1 cells’, with characteristic T-cell interacting properties, from other human B1 cells; this may be of relevance in the study...

VEGF Receptors, Angiogenesis and Cancer

Wednesday, May 8, 2013 - 12:49

Vascular endothelial growth factor receptors 1 and 2 (VEGFR1 and VEGFR2) are related family members of the vascular endothelial growth factor (VEGF) family of membrane receptor tyrosine kinases. They are key regulators of physiological angiogenesis during fundamental developmental processes such as embryogenesis, skeletal growth, and reproductive functions. Specifically, VEGF and its high-affinity binding receptors are thought to be important for the development of the embryonic vasculature. The VEGF-kinase ligand/receptor signaling system plays a key role in vascular development and regulation of vascular permeability. The VEGF signaling pathway has been heavily implicated in situations of pathological angiogenesis like those found with tumors, intraocular neovascular disorders, and other...

Analyzing Blood Diseases by Flow Cytometry

Tuesday, May 7, 2013 - 14:42

Studies on leukemias and other blood related malignancies is one of the most relevant investigational and medicinal applications of flow cytometry. In the bone marrow, normal blood cells undergo a progressive series of differentiation and branch off as myeloid, B and T cells. Hematological disorders can arise at any stage of the cell, while the differentiating cell will express a distinctive marker depending on the stage of differentiation. Antigen manifestation is routinely assessed by expending unconjugated monoclonal antibodies once the diagnosis of the hematological disorders has been recognized. Preliminary evaluations are usually made with a panel of antibodies using them in more than three combinations depending on the initial clinical observations.  Typically flow cytometry has been used for the diagnostic screening of B and T-cell...

Ku70: The DNA's Mr. Fix-it

Friday, May 3, 2013 - 10:19

Ku70, known by several synonyms including X-ray repair cross-complementing, 5'-deoxyribose-5-phosphate lyase Ku70 protein 6, 70 kDa subunit of Ku antigen, XRCC6, and G22P1, is a 70 kDa protein that was shown to be involved in multiple cellular pathways, mainly involving DNA repair and recombination (2). Ku70 functions as a single-stranded DNA-dependent ATP-dependent helicase in the Ku70/Ku80 complex.  Ku70 plays a role in non-homologous end joining (NHEJ) required for double-strand DNA break repair and V(D)J recombination.  Ku70 has also been found to participate in complex DNA strand breaks in association with Ku80, XRCC4/...

TrkB: Bridging Ontogenesis and Oncogenesis

Thursday, May 2, 2013 - 09:57

Tropomyosin receptor kinase B (TrkB) is a member of the Trk receptor tyrosine kinases family consisting of TrkA, TrkB and TrkC. The sequence of these family members is highly conserved. Interaction of brain-derived neurotrophic factor (BDNF) with its tropomyosin-related kinase receptor B TrkB is involved in fundamental cellular processes including neuronal proliferation, differentiation and survival as well as neurotransmitter release and synaptic plasticity (1).

Phosphotyrosine: A Global Player in Human Health and Disease

Wednesday, May 1, 2013 - 16:25

Protein tyrosine phosphorylation is a fundamental mechanism for controlling many aspects of cellular processes, as well as aspects of human health and diseases. Compared with phosphoserine and phosphothreonine, phosphotyrosine signaling is more tightly regulated, but often more challenging to characterize, due to significantly lower levels of tyrosine phosphorylation (1). While phosphorylation in general is fairly common, tyrosine phosphorylation is very rare. However, tyrosine phosphorylated proteins are very easy to purify, and therefore the few tyrosine phosphorylation sites on proteins are well-understood (2). Tyrosine kinase pathways are critical to proper cell growth, metabolic regulation, and normal differentiation which are in turn controlled by tyrosine phosphorylation while aberrant phospho-tyrosine signaling causes a breakdown in the normal regulation of cellular...

TLR9: Tollgate to Immunity

Wednesday, May 1, 2013 - 16:16

Toll-like receptors (TLRs) play an essential role in the activation of innate immunity, and TLRs are expressed in a large number of immune cells as well as in epithelial cells. TLR9 recognizes synthetic oligodeoxynucleotides (ODN) containing unmethylated deoxycytidyl-deoxyguanosine (CpG) motifs and mimics the immunostimulatory activity of bacterial DNA. It is now well established that TLR9 is also expressed in various cancer cells, including breast, brain, ovarian, gastric, lung and prostate cancer cells (1).  Protein expression of TLR9 assessed by immunohistochemistry and immunoblotting using anti-TLR9 antibodies demonstrated high levels...

Alpha-Synuclein: A Possibility for Early Diagnosis of Parkison's Disease

Wednesday, April 24, 2013 - 09:33

In the UK, 127,000 people are affected by the progressive neurodegenerative condition Parkinson's disease. Parkinson's is extremely difficult to diagnose in its early stages. The current method of diagnosis includes examination for physical signs of Parkinson's along with a detailed history of symptoms. The defining neuropathological characteristics of Parkinson's disease is Lewy bodies. Lewy bodies are protein aggregates found in nerve cells that eventually lead to neurodegeneration. Many previous studies have shown strong staining of Lewy bodies from Parkinson’s disease with antibodies for the protein alpha-Synuclein, suggesting it may be the main component of Parkinson’s disease degeneration.

Many researchers have been able to use antibodies to detect...

Muscular Dystrophy Regulation: Ezh2, NCoR-1

Tuesday, April 23, 2013 - 10:51

Over the years muscular dystrophies have become a popular area of research. These are a group of inherited disorders that involve an increase in muscle weakness over time. These disorders greatly decrease the quality of life and there are no known cures. Research in this area appears to have excelled in the past two years with findings related to the genes NCoR and EZH2.

The principle behind muscular dystrophies is the degeneration of muscle. During the development of muscle in infancy, muscle satellite cells are continuously proliferating. After infancy, the satellite cells will only proliferate by activation due to an injury. In these disorders, muscle satellite cells do not proliferate in response to muscle loss.  The activity of these cells appears to be controlled by the gene Ezh2. Researchers at...

Facts about FACS

Thursday, April 18, 2013 - 15:49

FACS (Fluorescence Activated Cell Sorting) was developed by Bonner, Sweet, Hulett, Herzenberg, and others to perform flow cytometry. Flow cytometry is a powerful analytical tool useful for the characterization or phenotypic identification of different populations of cells. Characteristics of individual particles or cells are rapidly measured as they pass through light emitted from a laser.  As the laser light is scattered by the cell, cell size and complexity or granularity can be estimated by forward scatter (FSC) and side scatter (SSC), respectively.  An amalgamation of both measurements is helpful in discriminating multiple cell types in a cohort of cell population.

Over the years, there has been an upsurge in additional measurable FACS parameters, spurred by enhanced availability of fluorescently labeled antibodies.  Fluorochrome-conjugated antibodies also...

Nestin: Investigating the Link Between New Brain Cells and Depression

Thursday, April 18, 2013 - 10:53

Clinical depression (also known as major depressive disorder or MDD) affects many people, but the biological processes that cause it (and are influenced by its treatments) are not well understood. Adult neurogenesis is a newly emerging field that could contribute to our knowledge of the etiology of depression and the effects of antidepressants. Nestin antibodies are key tools for this research, as they can be used to identify developing neurons.

Neurogenesis (generation of new neurons) takes place in the adult human brain, although only on a small scale and in certain locations, particularly within a region of the hippocampus called the dentate gyrus (DG). The neurogenesis hypothesis of depression posits that adult hippocampal neurogenesis is suppressed by stress, and is implicated in the development of depression (e.g. by increasing susceptibility); and that...

CD Markers and Evolving role of Antibodies in Flow Cytometry

Wednesday, April 17, 2013 - 12:10

Cluster of differentiation (CD) antigens are membrane proteins in nature that are predominantly expressed on the leukocyte surface. However diminutive sums of CD antigens have also been reported to be expressed on other cell types which include the endothelial, stem, and dendritic cells along with erythrocytes. The CD antigens associated with the surface membranes are usually involved in a variety of functions including receptors, transporters and ion channels. The CD nomenclature was originally envisioned for categorization of the several monoclonal antibodies produced against diverse epitopes of the cell surface molecules as a result of hybridoma technology. As precursor cells differentiate into a specific pedigree,...

Immunophenotyping: A Process of Identifying Cells and Cell Markers

Friday, April 12, 2013 - 07:49

Flow cytometry is one of the powerful tools for the investigators in immunological research involved in studying various immune cells. One of the main advantages of this technique is that is capable of multi-parameter measurements that can be accomplished on a single-cell basis. As a result of the advances in the flow cytometry researchers can now decrypt the phenotypes of several cell subsets in ways that were not possible using traditional assays, such as Western/immunoblotting, microarrays and enzyme-linked immunosorbent assays. Abundance of reagents and applications has led to a large array of ways in which flow cytometry is being used to screen and employ immunophenotyping assays to identify lymphocyte, monocyte, granulocyte and peripheral blood mononuclear cell subsets to name a few in humans and other model organisms. The choice of antibody cocktails and...

SREBPs: Global Regulator of Lipid Metabolism

Wednesday, April 10, 2013 - 08:14

Sterol regulatory element binding proteins (SREBPs) are indirectly required for cholesterol biosynthesis and for uptake and fatty acid biosynthesis. There are three known SREBP isoforms, SREBP1a, 1c and SREBP2; these have different roles in lipid synthesis. In vivo studies using transgenic and knockout mice suggest that SREBP-1c is involved in FA synthesis and insulin induced glucose metabolism, whereas SREBP-2 is relatively specific to cholesterol synthesis. The SREBP-1a isoform seems to be implicated in both pathways (1). Intracellular SREBPs can be modulated by different nutritional and hormonal cues at several levels, including transcription, translation, processing (maturation) and degradation. Intracellular processing of SREBP1A and SREBP2...

Myosin Molecular Motor of Membrane Cargo

Monday, April 8, 2013 - 08:10

The Myosin superfamily is a large and diverse protein family, and its members are grouped into many classes, are involved in a number of cellular pathways (1). Myosins contain actin- and ATP-binding sites in their conserved catalytic head domain and localize to a number of intracellular compartments and participate in many trafficking and anchoring events. A number of myosin-binding proteins have been discovered, and their identities have often provided information that is essential to the understanding of cellular functions of these motor proteins (2).

Immunohistochemistry-Paraffin: Myosin Antibody...

Perforin a Protective Serial Killer

Friday, April 5, 2013 - 07:55

Secretory granule-mediated cell death is one of the the key mechanisms for elimination of virus-infected and transformed target cells by cytotoxic lymphocytes. Formation of the immunological synapse between an effector and a target cell leads to exocytic trafficking of the secretory granules by releasing contents, which include pro-apoptotic proteases, granzymes, and pore-forming perforin into the synapse. The delivery of granzymes via perforin into the cytosol, initiate various apoptotic pathways. Unlike relatively redundant individual granzymes, functional perforin is absolutely essential for cytotoxic lymphocyte function and immune regulation in the host (1).

...

Synaptophysin a Marker Protein in Neuroendocrine Cells

Wednesday, April 3, 2013 - 08:54

Synaptophysin a Marker Protein in Neuroendocrine Cells Synaptophysin is a major integral membrane glycoprotein of neuronal synaptic vesicles present in virtually all synapses and shows a high degree of evolutionary conservation across the mammals. Synaptophysin has been detected in numerous endocrine cell types and is localized in the membrane of small synaptic-like vesicles. Antibodies directed against synaptophysin are a valuable tool for the immunoblotting and immunohistochemical quantification.

Synaptophysin expression in mouse brain hippocampus, IHC Synaptophysin was detected in perfusion fixed frozen sections of mouse brain (...

MYD88 Expression and Tumorigenesis

Thursday, March 28, 2013 - 09:51

MyD88, also called myeloid differentiation primary response gene 88, encodes a cytosolic adapter protein that plays an essential role in innate and adaptive immune responses. The innate immune system recognizes the presence of bacterial pathogens through the expression of a family known as Toll-like receptors (TLRs). TLRs recognize microbial-associated or pathogen-associated molecular patterns, which leads to the production of pro-inflammatory cytokines (1). Chronic infection and inflammation are considered to be some of the most important epigenetic and environmental factors contributing to tumorigenesis and tumor progression. MyD88, a TLRs signaling adaptor protein, is an essential...

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